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P-Body Purification Reveals the Condensation of Repressed mRNA Regulons.
- Source :
-
Molecular cell [Mol Cell] 2017 Oct 05; Vol. 68 (1), pp. 144-157.e5. Date of Electronic Publication: 2017 Sep 28. - Publication Year :
- 2017
-
Abstract
- Within cells, soluble RNPs can switch states to coassemble and condense into liquid or solid bodies. Although these phase transitions have been reconstituted in vitro, for endogenous bodies the diversity of the components, the specificity of the interaction networks, and the function of the coassemblies remain to be characterized. Here, by developing a fluorescence-activated particle sorting (FAPS) method to purify cytosolic processing bodies (P-bodies) from human epithelial cells, we identified hundreds of proteins and thousands of mRNAs that structure a dense network of interactions, separating P-body from non-P-body RNPs. mRNAs segregating into P-bodies are translationally repressed, but not decayed, and this repression explains part of the poor genome-wide correlation between RNA and protein abundance. P-bodies condense thousands of mRNAs that strikingly encode regulatory processes. Thus, we uncovered how P-bodies, by condensing and segregating repressed mRNAs, provide a physical substrate for the coordinated regulation of posttranscriptional mRNA regulons.<br /> (Copyright © 2017 Elsevier Inc. All rights reserved.)
- Subjects :
- Cell Fractionation
Cytoplasm metabolism
Cytoplasmic Granules chemistry
Cytoplasmic Granules metabolism
Gene Ontology
HEK293 Cells
HeLa Cells
Humans
Molecular Sequence Annotation
Phase Transition
Protein Biosynthesis
Proteome metabolism
RNA Stability
RNA, Messenger metabolism
Ribonucleoproteins metabolism
Gene Expression Regulation
Proteome genetics
RNA, Messenger genetics
Regulon
Ribonucleoproteins genetics
Subjects
Details
- Language :
- English
- ISSN :
- 1097-4164
- Volume :
- 68
- Issue :
- 1
- Database :
- MEDLINE
- Journal :
- Molecular cell
- Publication Type :
- Academic Journal
- Accession number :
- 28965817
- Full Text :
- https://doi.org/10.1016/j.molcel.2017.09.003