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Herbidospora soli sp. nov., isolated from soil.

Authors :
Niemhom N
Thawai C
Source :
International journal of systematic and evolutionary microbiology [Int J Syst Evol Microbiol] 2018 Jan; Vol. 68 (1), pp. 294-298. Date of Electronic Publication: 2017 Nov 21.
Publication Year :
2018

Abstract

A novel actinomycete strain PS42-9 <superscript>T</superscript> , which formed short chains of spores borne on the tip of long sporophores arising from the substrate mycelium, was isolated from soil in Phu-Sang National Park, Phayao province, Thailand. The isolate contained meso-diaminopimelic acid in the cell-wall peptidoglycan. The whole-cell sugars of strain PS42-9 <superscript>T</superscript> were glucose, madurose, mannose, rhamnose and ribose. The characteristic phospholipids were phosphatidylethanolamine, phosphatidylmethylethanolamine, hydroxyphosphatidylethanolamine and ninhydrin-positive glycophospholipids. The major menaquinone was MK-10(H4). The main cellular fatty acids were C17 : 1ω8c and C17 : 0. The G+C content of the genomic DNA was 71.5 mol%. Phylogenetic analysis using 16S rRNA gene sequences revealed that strain PS42-9 <superscript>T</superscript> should be classified in the genus Herbidospora and was closely related to Herbidospora sakaeratensis DMKUA 205 <superscript>T</superscript> (99.10 %) and Herbidospora yilanensis NBRC 106371 <superscript>T</superscript> (98.61 %). The result of DNA-DNA hybridization and some physiological and biochemical properties indicated that strain PS42-9 <superscript>T</superscript> could be readily distinguished from its closest phylogenetic relatives. On the basis of these phenotypic and genotypic data, this strain represents a novel species, for which the name Herbidospora soli sp. nov. is proposed. The type strain is PS42-9 <superscript>T</superscript> (=BCC 46909 <superscript>T</superscript> =NBRC 108780 <superscript>T</superscript> ).

Details

Language :
English
ISSN :
1466-5034
Volume :
68
Issue :
1
Database :
MEDLINE
Journal :
International journal of systematic and evolutionary microbiology
Publication Type :
Academic Journal
Accession number :
29160198
Full Text :
https://doi.org/10.1099/ijsem.0.002503