Back to Search
Start Over
Stakelama algicida sp. nov., novel algicidal species of the family Sphingomonadaceae isolated from seawater.
- Source :
-
International journal of systematic and evolutionary microbiology [Int J Syst Evol Microbiol] 2018 Jan; Vol. 68 (1), pp. 317-323. Date of Electronic Publication: 2017 Dec 05. - Publication Year :
- 2018
-
Abstract
- We conducted a taxonomic study of two algicidal bacteria, designated strains Yeonmyeong 1-13 <superscript>T</superscript> and Yeonmyeong 1-11, isolated from seawater off Geoje Island in the South Sea, Republic of Korea. The two novel strains were yellow-pigmented, halotolerant, Gram-stain-negative, strictly aerobic, non-spore-forming, rod-shaped bacteria. Both strains were able to grow at 5-39 °C, pH 5.0-10.0 and 0-11 % (w/v) NaCl concentration. Based on the 16S rRNA gene sequence analysis, strains Yeonmyeong 1-13 <superscript>T</superscript> and Yeonmyeong 1-11 belonged to the genus Stakelama and are closely related to Stakelama pacifica JLT832 <superscript>T</superscript> (98.37% and 98.22 % sequence similarity, respectively). The pairwise sequence similarity between strains Yeonmyeong 1-13 <superscript>T</superscript> and Yeonmyeong 1-11 was observed to be 99.50 %. In both strains, the only respiratory quinone was ubiquinone-10; the major polar lipids were phosphatidylethanolamine, phosphatidylglycerol, diphosphatidylglycerol, phosphatidylcholine and sphingoglycolipid; the major fatty acids were C18 : 1ω7c, C16 : 0 and C14 : 0 2-OH. DNA G+C content values of strains Yeonmyeong 1-13 <superscript>T</superscript> and Yeonmyeong 1-11 were 65.1% and 64.9 mol%, respectively. The DNA-DNA relatedness between Yeonmyeong 1-13 <superscript>T</superscript> and S. pacifica DSM 25059 <superscript>T</superscript> was 28.7 %, which falls below the threshold value of 70 % for the strain to be considered as novel. The morphological, physiological, chemotaxonomic and phylogenetic analyses clearly distinguished strain Yeonmyeong 1-13 <superscript>T</superscript> from its closest phylogenetic neighbours. Thus, strains Yeonmyeong 1-13 <superscript>T</superscript> and Yeonmyeong 1-11 represent a novel species of the genus Stakelama, for which the name Stakelama algicida sp. nov. is proposed. The type strain is Yeonmyeong 1-13 <superscript>T</superscript> (=KEMB 9005-324 <superscript>T</superscript> =JCM 31498 <superscript>T</superscript> ).
- Subjects :
- Bacterial Typing Techniques
Base Composition
DNA, Bacterial genetics
Fatty Acids chemistry
Nucleic Acid Hybridization
Phospholipids chemistry
Pigmentation
RNA, Ribosomal, 16S genetics
Republic of Korea
Sequence Analysis, DNA
Sphingomonadaceae genetics
Sphingomonadaceae isolation & purification
Ubiquinone chemistry
Phylogeny
Seawater microbiology
Sphingomonadaceae classification
Water Microbiology
Subjects
Details
- Language :
- English
- ISSN :
- 1466-5034
- Volume :
- 68
- Issue :
- 1
- Database :
- MEDLINE
- Journal :
- International journal of systematic and evolutionary microbiology
- Publication Type :
- Academic Journal
- Accession number :
- 29205132
- Full Text :
- https://doi.org/10.1099/ijsem.0.002506