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Larkinella knui sp. nov., isolated from soil.
- Source :
-
International journal of systematic and evolutionary microbiology [Int J Syst Evol Microbiol] 2018 Feb; Vol. 68 (2), pp. 582-588. Date of Electronic Publication: 2018 Jan 04. - Publication Year :
- 2018
-
Abstract
- A Gram-stain-negative, motile by gliding, rod-shaped, aerobic bacterium, designated 15J6-3T6 <superscript>T</superscript> , was isolated from a soil sample collected from Jeju Island, South Korea, and characterized taxonomically using a polyphasic approach. Comparative 16S rRNA gene sequence analysis showed that strain 15J6-3T6 <superscript>T</superscript> belongs to the family Cytophagaceae and is related to Larkinella harenae 15J9-9 <superscript>T</superscript> (93.9 % similarity), Larkinella arboricola Z0532 <superscript>T</superscript> (93.6 %), Larkinella bovis M2TB15 <superscript>T</superscript> (93.3 %), and Larkinella insperata LMG 22510 <superscript>T</superscript> (93.3 %). The DNA G+C content of strain 15J6-3T6 <superscript>T</superscript> was 50.6 mol%. The detection of phosphatidylethanolamine and an unidentified polar lipid as major polar lipids, menaquinone-7 as the predominant quinone, and C16 : 1ω5c, iso-C15 : 0, and iso-C17 : 0 3-OH as the major fatty acids also supports the affiliation of the isolate to the genus Larkinella. Based on its phenotypic properties and phylogenetic distinctiveness, we propose that strain 15J6-3T6 <superscript>T</superscript> should be classified in the genus Larkinella as a representative of a novel species, for which the name Larkinella knui sp. nov. is proposed. The type strain is 15J6-3T6 <superscript>T</superscript> (=KCTC 42998 <superscript>T</superscript> =JCM 31989 <superscript>T</superscript> ).
- Subjects :
- Bacterial Typing Techniques
Base Composition
Cytophagaceae genetics
Cytophagaceae isolation & purification
DNA, Bacterial genetics
Fatty Acids chemistry
Phosphatidylethanolamines chemistry
RNA, Ribosomal, 16S genetics
Republic of Korea
Sequence Analysis, DNA
Vitamin K 2 analogs & derivatives
Vitamin K 2 chemistry
Cytophagaceae classification
Phylogeny
Soil Microbiology
Subjects
Details
- Language :
- English
- ISSN :
- 1466-5034
- Volume :
- 68
- Issue :
- 2
- Database :
- MEDLINE
- Journal :
- International journal of systematic and evolutionary microbiology
- Publication Type :
- Academic Journal
- Accession number :
- 29300161
- Full Text :
- https://doi.org/10.1099/ijsem.0.002550