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Dokdonia aurantiaca sp. nov., isolated from seaweed Zostera marina.
- Source :
-
International journal of systematic and evolutionary microbiology [Int J Syst Evol Microbiol] 2018 May; Vol. 68 (5), pp. 1697-1701. Date of Electronic Publication: 2018 Mar 23. - Publication Year :
- 2018
-
Abstract
- A non-motile, orange-coloured and rod-shaped bacterial strain, designated strain ZOW29 <superscript>T</superscript> , was isolated from a seaweed sample collected from the South Sea, Republic of Korea. Cells were Gram-stain-negative, aerobic and non-motile. The isolate required sea salts for growth. Carotenoid pigment was produced. A phylogenetic tree based on 16S rRNA gene sequences showed that strain ZOW29 <superscript>T</superscript> forms an evolutionary lineage within the radiation enclosing the members of the genus Dokdonia with Dokdonia diaphoros MSKK-32 <superscript>T</superscript> , Dokdonia eikasta PMA-26 <superscript>T</superscript> and Dokdonia donghaensis DSW-1 <superscript>T</superscript> (97.1 % sequence similarity each) as its nearest neighbours. The DNA-DNA relatedness values between strain ZOW29 <superscript>T</superscript> and these four type strains were 35-48 %. The major fatty acids were iso-C15:0, iso-C17 : 0 3-OH and iso-C15 : 1 G. Strain ZOW29 <superscript>T</superscript> contained MK-6 and phosphatidylethanolamine, an unidentified aminolipid and an unidentified polar lipid as the only isoprenoid quinone and the major polar lipids, respectively. The DNA G+C content of strain ZOW29 <superscript>T</superscript> was 38 mol%. On the basis of polyphasic characterization, it is suggested that the isolate represents a novel species of the genus Dokdonia, for which the name Dokdonia aurantiaca sp. nov. (type strain, ZOW29 <superscript>T</superscript> =KCTC 52956 <superscript>T</superscript> =JCM 32295 <superscript>T</superscript> ) is proposed.
- Subjects :
- Bacterial Typing Techniques
Base Composition
DNA, Bacterial genetics
Fatty Acids chemistry
Flavobacteriaceae genetics
Flavobacteriaceae isolation & purification
Nucleic Acid Hybridization
Phosphatidylethanolamines chemistry
Pigmentation
RNA, Ribosomal, 16S genetics
Republic of Korea
Sequence Analysis, DNA
Vitamin K 2 analogs & derivatives
Vitamin K 2 chemistry
Flavobacteriaceae classification
Phylogeny
Seaweed microbiology
Zosteraceae microbiology
Subjects
Details
- Language :
- English
- ISSN :
- 1466-5034
- Volume :
- 68
- Issue :
- 5
- Database :
- MEDLINE
- Journal :
- International journal of systematic and evolutionary microbiology
- Publication Type :
- Academic Journal
- Accession number :
- 29570445
- Full Text :
- https://doi.org/10.1099/ijsem.0.002730