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Noncontiguous finished genome sequence and description of Intestinimonas massiliensis sp. nov strain GD2 T , the second Intestinimonas species cultured from the human gut.
- Source :
-
MicrobiologyOpen [Microbiologyopen] 2019 Jan; Vol. 8 (1), pp. e00621. Date of Electronic Publication: 2018 Apr 14. - Publication Year :
- 2019
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Abstract
- Intestinimonas massiliensis sp. nov strain GD2 <superscript>T</superscript> is a new species of the genus Intestinimonas (the second, following Intestinimonas butyriciproducens gen. nov., sp. nov). First isolated from the gut microbiota of a healthy subject of French origin using a culturomics approach combined with taxono-genomics, it is strictly anaerobic, nonspore-forming, rod-shaped, with catalase- and oxidase-negative reactions. Its growth was observed after preincubation in an anaerobic blood culture enriched with sheep blood (5%) and rumen fluid (5%), incubated at 37°C. Its phenotypic and genotypic descriptions are presented in this paper with a full annotation of its genome sequence. This genome consists of 3,104,261 bp in length and contains 3,074 predicted genes, including 3,012 protein-coding genes and 62 RNA-coding genes. Strain GD2 <superscript>T</superscript> significantly produces butyrate and is frequently found among available 16S rRNA gene amplicon datasets, which leads consideration of Intestinimonas massiliensis as an important human gut commensal.<br /> (© 2018 The Authors. MicrobiologyOpen published by John Wiley & Sons Ltd.)
- Subjects :
- Anaerobiosis
Animals
Bacterial Typing Techniques
Clostridiales genetics
Clostridiales physiology
DNA, Bacterial chemistry
DNA, Bacterial genetics
Humans
Molecular Sequence Annotation
Phylogeny
Sheep
Temperature
Clostridiales classification
Clostridiales isolation & purification
Gastrointestinal Tract microbiology
Genome, Bacterial
Sequence Analysis, DNA
Subjects
Details
- Language :
- English
- ISSN :
- 2045-8827
- Volume :
- 8
- Issue :
- 1
- Database :
- MEDLINE
- Journal :
- MicrobiologyOpen
- Publication Type :
- Academic Journal
- Accession number :
- 29654664
- Full Text :
- https://doi.org/10.1002/mbo3.621