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Noncontiguous finished genome sequence and description of Intestinimonas massiliensis sp. nov strain GD2 T , the second Intestinimonas species cultured from the human gut.

Authors :
Afouda P
Durand GA
Lagier JC
Labas N
Cadoret F
Armstrong N
Raoult D
Dubourg G
Source :
MicrobiologyOpen [Microbiologyopen] 2019 Jan; Vol. 8 (1), pp. e00621. Date of Electronic Publication: 2018 Apr 14.
Publication Year :
2019

Abstract

Intestinimonas massiliensis sp. nov strain GD2 <superscript>T</superscript> is a new species of the genus Intestinimonas (the second, following Intestinimonas butyriciproducens gen. nov., sp. nov). First isolated from the gut microbiota of a healthy subject of French origin using a culturomics approach combined with taxono-genomics, it is strictly anaerobic, nonspore-forming, rod-shaped, with catalase- and oxidase-negative reactions. Its growth was observed after preincubation in an anaerobic blood culture enriched with sheep blood (5%) and rumen fluid (5%), incubated at 37°C. Its phenotypic and genotypic descriptions are presented in this paper with a full annotation of its genome sequence. This genome consists of 3,104,261 bp in length and contains 3,074 predicted genes, including 3,012 protein-coding genes and 62 RNA-coding genes. Strain GD2 <superscript>T</superscript> significantly produces butyrate and is frequently found among available 16S rRNA gene amplicon datasets, which leads consideration of Intestinimonas massiliensis as an important human gut commensal.<br /> (© 2018 The Authors. MicrobiologyOpen published by John Wiley & Sons Ltd.)

Details

Language :
English
ISSN :
2045-8827
Volume :
8
Issue :
1
Database :
MEDLINE
Journal :
MicrobiologyOpen
Publication Type :
Academic Journal
Accession number :
29654664
Full Text :
https://doi.org/10.1002/mbo3.621