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The ARID1B spectrum in 143 patients: from nonsyndromic intellectual disability to Coffin-Siris syndrome.
- Source :
-
Genetics in medicine : official journal of the American College of Medical Genetics [Genet Med] 2019 Jun; Vol. 21 (6), pp. 1295-1307. Date of Electronic Publication: 2018 Nov 08. - Publication Year :
- 2019
-
Abstract
- Purpose: Pathogenic variants in ARID1B are one of the most frequent causes of intellectual disability (ID) as determined by large-scale exome sequencing studies. Most studies published thus far describe clinically diagnosed Coffin-Siris patients (ARID1B-CSS) and it is unclear whether these data are representative for patients identified through sequencing of unbiased ID cohorts (ARID1B-ID). We therefore sought to determine genotypic and phenotypic differences between ARID1B-ID and ARID1B-CSS. In parallel, we investigated the effect of different methods of phenotype reporting.<br />Methods: Clinicians entered clinical data in an extensive web-based survey.<br />Results: 79 ARID1B-CSS and 64 ARID1B-ID patients were included. CSS-associated dysmorphic features, such as thick eyebrows, long eyelashes, thick alae nasi, long and/or broad philtrum, small nails and small or absent fifth distal phalanx and hypertrichosis, were observed significantly more often (p < 0.001) in ARID1B-CSS patients. No other significant differences were identified.<br />Conclusion: There are only minor differences between ARID1B-ID and ARID1B-CSS patients. ARID1B-related disorders seem to consist of a spectrum, and patients should be managed similarly. We demonstrated that data collection methods without an explicit option to report the absence of a feature (such as most Human Phenotype Ontology-based methods) tended to underestimate gene-related features.
- Subjects :
- Abnormalities, Multiple genetics
Adolescent
Adult
Child
Child, Preschool
Chromosomal Proteins, Non-Histone genetics
Exome
Face abnormalities
Female
Genetic Association Studies methods
Genetic Variation genetics
Hand Deformities, Congenital genetics
Humans
Infant
Infant, Newborn
Intellectual Disability genetics
Male
Micrognathism genetics
Middle Aged
Mutation
Neck abnormalities
Penetrance
DNA-Binding Proteins genetics
DNA-Binding Proteins metabolism
Transcription Factors genetics
Transcription Factors metabolism
Subjects
Details
- Language :
- English
- ISSN :
- 1530-0366
- Volume :
- 21
- Issue :
- 6
- Database :
- MEDLINE
- Journal :
- Genetics in medicine : official journal of the American College of Medical Genetics
- Publication Type :
- Academic Journal
- Accession number :
- 30349098
- Full Text :
- https://doi.org/10.1038/s41436-018-0330-z