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A genome-wide dsRNA library screen for Drosophila genes that regulate the GBP/phospholipase C signaling axis that links inflammation to aging.

Authors :
Sung EJ
Shears SB
Source :
BMC research notes [BMC Res Notes] 2018 Dec 13; Vol. 11 (1), pp. 884. Date of Electronic Publication: 2018 Dec 13.
Publication Year :
2018

Abstract

Objective: Invertebrates are productive models for understanding how inflammation, metabolism and aging are intertwined. We have deployed a dsRNA library screen to search for genes in Drosophila melanogaster-and hence identify human orthologs-that encode participants in a G-protein coupled, Ca <superscript>2+</superscript> -signaling pathway that regulates inflammation, metabolism and lifespan.<br />Results: We analyzed receptor-dependent, phospholipase C/Ca <superscript>2+</superscript> signaling responses to the growth-blocking peptide (GBP) cytokine in Drosophila S3 cells plated in 384-well plates containing dsRNAs that target approximately 14,000 Drosophila genes. We used Z-scores of < - 3 or > + 3 to define gene hits. Filtering of 'housekeeping' genes from these hits yielded a total of 82 and 61 Drosophila genes that either down-regulate or up-regulate Ca <superscript>2+</superscript> -signaling, respectively; representatives from these two groups were validated. Human orthologs of our hits may be modulators of Ca <superscript>2+</superscript> signaling in general, as well as being candidates for acting in molecular pathways that interconnect aging and inflammation.

Details

Language :
English
ISSN :
1756-0500
Volume :
11
Issue :
1
Database :
MEDLINE
Journal :
BMC research notes
Publication Type :
Academic Journal
Accession number :
30545410
Full Text :
https://doi.org/10.1186/s13104-018-3996-z