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Alteration of tumor suppressor BMP5 in sporadic colorectal cancer: a genomic and transcriptomic profiling based study.
- Source :
-
Molecular cancer [Mol Cancer] 2018 Dec 20; Vol. 17 (1), pp. 176. Date of Electronic Publication: 2018 Dec 20. - Publication Year :
- 2018
-
Abstract
- Background: Although the genetic spectrum of human colorectal cancer (CRC) is mainly characterized by APC, KRAS and TP53 mutations, driver genes in tumor initiation have not been conclusively demonstrated. In this study, we aimed to identify novel markers for CRC.<br />Methods: We performed exome analysis of sporadic colorectal cancer (sCRC) coding regions to screen loss of function (LoF) mutation genes, and carried out systems-level approaches to confirm top rank gene in this study.<br />Results: We identified loss of BMP5 is an early event in CRC. Deep sequencing identified BMP5 was mutated in 7.7% (8/104) of sCRC samples, with 37.5% truncating mutation frequency. Notably, BMP5 negative expression and its prognostic value is uniquely significant in sCRC but not in other tumor types. Furthermore, BMP5 expression was positively correlated with E-cadherin in CRC patients and its dysregulation play a vital role in epithelial-mesenchymal transition (EMT), thus triggering tumor initiation and development. RNA sequencing identified, independent of BMP/Smads pathway, BMP5 signaled though Jak-Stat pathways to inhibit the activation of oncogene EPSTI1.<br />Conclusions: Our result support a novel concept that the importance of BMP5 in sCRC. The tumor suppressor role of BMP5 highlights its crucial role in CRC initiation and development.
- Subjects :
- Cell Line, Tumor
Colorectal Neoplasms metabolism
Epithelial-Mesenchymal Transition genetics
Gene Expression Profiling methods
HCT116 Cells
HT29 Cells
Humans
Mutation genetics
Signal Transduction
Smad Proteins genetics
Transcriptome
Bone Morphogenetic Protein 5 genetics
Colorectal Neoplasms genetics
Tumor Suppressor Proteins genetics
Subjects
Details
- Language :
- English
- ISSN :
- 1476-4598
- Volume :
- 17
- Issue :
- 1
- Database :
- MEDLINE
- Journal :
- Molecular cancer
- Publication Type :
- Academic Journal
- Accession number :
- 30572883
- Full Text :
- https://doi.org/10.1186/s12943-018-0925-7