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Canvass: A Crowd-Sourced, Natural-Product Screening Library for Exploring Biological Space.

Authors :
Kearney SE
Zahoránszky-Kőhalmi G
Brimacombe KR
Henderson MJ
Lynch C
Zhao T
Wan KK
Itkin Z
Dillon C
Shen M
Cheff DM
Lee TD
Bougie D
Cheng K
Coussens NP
Dorjsuren D
Eastman RT
Huang R
Iannotti MJ
Karavadhi S
Klumpp-Thomas C
Roth JS
Sakamuru S
Sun W
Titus SA
Yasgar A
Zhang YQ
Zhao J
Andrade RB
Brown MK
Burns NZ
Cha JK
Mevers EE
Clardy J
Clement JA
Crooks PA
Cuny GD
Ganor J
Moreno J
Morrill LA
Picazo E
Susick RB
Garg NK
Goess BC
Grossman RB
Hughes CC
Johnston JN
Joullie MM
Kinghorn AD
Kingston DGI
Krische MJ
Kwon O
Maimone TJ
Majumdar S
Maloney KN
Mohamed E
Murphy BT
Nagorny P
Olson DE
Overman LE
Brown LE
Snyder JK
Porco JA Jr
Rivas F
Ross SA
Sarpong R
Sharma I
Shaw JT
Xu Z
Shen B
Shi W
Stephenson CRJ
Verano AL
Tan DS
Tang Y
Taylor RE
Thomson RJ
Vosburg DA
Wu J
Wuest WM
Zakarian A
Zhang Y
Ren T
Zuo Z
Inglese J
Michael S
Simeonov A
Zheng W
Shinn P
Jadhav A
Boxer MB
Hall MD
Xia M
Guha R
Rohde JM
Source :
ACS central science [ACS Cent Sci] 2018 Dec 26; Vol. 4 (12), pp. 1727-1741. Date of Electronic Publication: 2018 Dec 05.
Publication Year :
2018

Abstract

Natural products and their derivatives continue to be wellsprings of nascent therapeutic potential. However, many laboratories have limited resources for biological evaluation, leaving their previously isolated or synthesized compounds largely or completely untested. To address this issue, the Canvass library of natural products was assembled, in collaboration with academic and industry researchers, for quantitative high-throughput screening (qHTS) across a diverse set of cell-based and biochemical assays. Characterization of the library in terms of physicochemical properties, structural diversity, and similarity to compounds in publicly available libraries indicates that the Canvass library contains many structural elements in common with approved drugs. The assay data generated were analyzed using a variety of quality control metrics, and the resultant assay profiles were explored using statistical methods, such as clustering and compound promiscuity analyses. Individual compounds were then sorted by structural class and activity profiles. Differential behavior based on these classifications, as well as noteworthy activities, are outlined herein. One such highlight is the activity of (-)-2( S )-cathafoline, which was found to stabilize calcium levels in the endoplasmic reticulum. The workflow described here illustrates a pilot effort to broadly survey the biological potential of natural products by utilizing the power of automation and high-throughput screening.<br />Competing Interests: The authors declare no competing financial interest.

Details

Language :
English
ISSN :
2374-7943
Volume :
4
Issue :
12
Database :
MEDLINE
Journal :
ACS central science
Publication Type :
Academic Journal
Accession number :
30648156
Full Text :
https://doi.org/10.1021/acscentsci.8b00747