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Shared heritability and functional enrichment across six solid cancers.
- Source :
-
Nature communications [Nat Commun] 2019 Jan 25; Vol. 10 (1), pp. 431. Date of Electronic Publication: 2019 Jan 25. - Publication Year :
- 2019
-
Abstract
- Quantifying the genetic correlation between cancers can provide important insights into the mechanisms driving cancer etiology. Using genome-wide association study summary statistics across six cancer types based on a total of 296,215 cases and 301,319 controls of European ancestry, here we estimate the pair-wise genetic correlations between breast, colorectal, head/neck, lung, ovary and prostate cancer, and between cancers and 38 other diseases. We observed statistically significant genetic correlations between lung and head/neck cancer (r <subscript>g</subscript> = 0.57, p = 4.6 × 10 <superscript>-8</superscript> ), breast and ovarian cancer (r <subscript>g</subscript> = 0.24, p = 7 × 10 <superscript>-5</superscript> ), breast and lung cancer (r <subscript>g</subscript> = 0.18, p =1.5 × 10 <superscript>-6</superscript> ) and breast and colorectal cancer (r <subscript>g</subscript> = 0.15, p = 1.1 × 10 <superscript>-4</superscript> ). We also found that multiple cancers are genetically correlated with non-cancer traits including smoking, psychiatric diseases and metabolic characteristics. Functional enrichment analysis revealed a significant excess contribution of conserved and regulatory regions to cancer heritability. Our comprehensive analysis of cross-cancer heritability suggests that solid tumors arising across tissues share in part a common germline genetic basis.
- Subjects :
- Breast Neoplasms diagnosis
Breast Neoplasms ethnology
Breast Neoplasms pathology
Case-Control Studies
Colorectal Neoplasms diagnosis
Colorectal Neoplasms ethnology
Colorectal Neoplasms pathology
Female
Genetic Predisposition to Disease
Genome-Wide Association Study
Head and Neck Neoplasms diagnosis
Head and Neck Neoplasms ethnology
Head and Neck Neoplasms pathology
Humans
Lung Neoplasms diagnosis
Lung Neoplasms ethnology
Lung Neoplasms pathology
Male
Mental Disorders ethnology
Mental Disorders genetics
Mental Disorders physiopathology
Neoplasm Proteins genetics
Ovarian Neoplasms diagnosis
Ovarian Neoplasms ethnology
Ovarian Neoplasms pathology
Phenotype
Polymorphism, Single Nucleotide
Prostatic Neoplasms diagnosis
Prostatic Neoplasms ethnology
Prostatic Neoplasms pathology
Smoking ethnology
Smoking genetics
Smoking physiopathology
White People
Breast Neoplasms genetics
Colorectal Neoplasms genetics
Head and Neck Neoplasms genetics
Inheritance Patterns
Lung Neoplasms genetics
Ovarian Neoplasms genetics
Prostatic Neoplasms genetics
Subjects
Details
- Language :
- English
- ISSN :
- 2041-1723
- Volume :
- 10
- Issue :
- 1
- Database :
- MEDLINE
- Journal :
- Nature communications
- Publication Type :
- Academic Journal
- Accession number :
- 30683880
- Full Text :
- https://doi.org/10.1038/s41467-018-08054-4