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Genome-wide analysis of HSP70 family genes in cabbage (Brassica oleracea var. capitata) reveals their involvement in floral development.
- Source :
-
BMC genomics [BMC Genomics] 2019 May 14; Vol. 20 (1), pp. 369. Date of Electronic Publication: 2019 May 14. - Publication Year :
- 2019
-
Abstract
- Background: Heat shock proteins have important functions in regulating plant growth and response to abiotic stress. HSP70 family genes have been described in several plant species, but a comprehensive analysis of the HSP70 family genes in cabbage has not been reported to date, especially their roles in floral development.<br />Results: In this study, we identified 52 BoHSP70 genes in cabbage. The gene structures, motifs, and chromosome locations of the BoHSP70 genes were analyzed. The genes were divided into seven classes using a phylogenetic analysis. An expression analysis showed that the BoHSP70 genes were highly expressed in actively growing tissues, including buds and calluses. In addition, six BoHSP70 genes were highly expressed in the binuclear-pollen-stage buds of a male fertile line compared with its near isogenic sterile line. These results were further verified using qRT-PCR. Subcellular localization analysis of the bud-specific gene BoHSP70-5 showed that it was localized in the cytoplasm.<br />Conclusions: Our results help to elucidate the involvement of the BoHSP70 family genes in cabbage floral development and establish the groundwork for future research on the functions of these genes.
- Subjects :
- Brassica genetics
Chromosome Mapping
Chromosomes, Plant
Cytoplasm genetics
Gene Expression Profiling
Gene Expression Regulation, Developmental
Gene Expression Regulation, Plant
Multigene Family
Phylogeny
Plant Proteins genetics
Brassica physiology
Flowers growth & development
HSP70 Heat-Shock Proteins genetics
Up-Regulation
Subjects
Details
- Language :
- English
- ISSN :
- 1471-2164
- Volume :
- 20
- Issue :
- 1
- Database :
- MEDLINE
- Journal :
- BMC genomics
- Publication Type :
- Academic Journal
- Accession number :
- 31088344
- Full Text :
- https://doi.org/10.1186/s12864-019-5757-3