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Facilitating reproducible project management and manuscript development in team science: The projects R package.

Authors :
Krieger NI
Perzynski AT
Dalton JE
Source :
PloS one [PLoS One] 2019 Jul 29; Vol. 14 (7), pp. e0212390. Date of Electronic Publication: 2019 Jul 29 (Print Publication: 2019).
Publication Year :
2019

Abstract

The contemporary scientific community places a growing emphasis on the reproducibility of research. The projects R package is a free, open-source package created in the interest of facilitating reproducible research workflows. It adds to existing software tools for reproducible research and introduces several practical features that are helpful for scientists and their collaborative research teams. For each individual project, it supplies a framework for storing raw and cleaned study data sets, and it provides script templates for protocol creation, data cleaning, data analysis and manuscript development. Internal databases of project and author information are generated and displayed, and manuscript title pages containing author lists and their affiliations are automatically generated from the internal database. File management tools allow teams to organize multiple projects. When used on a shared file system, multiple researchers can harmoniously contribute to the same project in a less punctuated manner, reducing the frequency of misunderstandings and the need for status updates.<br />Competing Interests: The authors have declared that no competing interests exist.

Details

Language :
English
ISSN :
1932-6203
Volume :
14
Issue :
7
Database :
MEDLINE
Journal :
PloS one
Publication Type :
Academic Journal
Accession number :
31356588
Full Text :
https://doi.org/10.1371/journal.pone.0212390