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Genetic signature related to heme-hemoglobin metabolism pathway in sepsis secondary to pneumonia.
- Source :
-
NPJ systems biology and applications [NPJ Syst Biol Appl] 2019 Aug 01; Vol. 5, pp. 26. Date of Electronic Publication: 2019 Aug 01 (Print Publication: 2019). - Publication Year :
- 2019
-
Abstract
- Sepsis is defined as a life-threatening organ dysfunction caused by a dysregulated inflammatory response to pathogens. Bioinformatics and transcriptomics studies contribute to get a better understanding of the pathogenesis of sepsis. These studies revealed differentially expressed genes (DEGs) in sepsis involved in several pathways. Here we investigated the gene expression profiles of blood leukocytes using three microarray datasets of sepsis secondary to pneumonia, focusing on the heme/hemoglobin metabolism pathway. We demonstrate that the heme/hemoglobin metabolism pathway was found to be enriched in these three cohorts with four common genes ( ALAS2 , AHSP , HBD , and CA1 ). Several studies show that these four genes are involved in the cytoprotection of non-erythrocyte cells in response to different stress conditions. The upregulation of heme/hemoglobin metabolism in sepsis might be a protective response of white cells to the hostile environment present in septic patients (follow-up samples).<br />Competing Interests: Competing interestsThe authors declare that they have no competing interests.
- Subjects :
- 5-Aminolevulinate Synthetase genetics
5-Aminolevulinate Synthetase metabolism
Blood Proteins genetics
Blood Proteins metabolism
Carbonic Anhydrases genetics
Carbonic Anhydrases metabolism
Computational Biology methods
Databases, Genetic
Gene Expression Profiling methods
Gene Ontology
Heme genetics
Hemoglobin Subunits genetics
Hemoglobin Subunits metabolism
Hemoglobins genetics
Humans
Molecular Chaperones genetics
Molecular Chaperones metabolism
Pneumonia complications
Pneumonia genetics
Sepsis blood
Sepsis metabolism
Transcriptome genetics
Heme metabolism
Hemoglobins metabolism
Sepsis genetics
Subjects
Details
- Language :
- English
- ISSN :
- 2056-7189
- Volume :
- 5
- Database :
- MEDLINE
- Journal :
- NPJ systems biology and applications
- Publication Type :
- Academic Journal
- Accession number :
- 31396396
- Full Text :
- https://doi.org/10.1038/s41540-019-0105-4