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Relativistic quantum crystallography of diphenyl- and dicyanomercury. Theoretical structure factors and Hirshfeld atom refinement.

Authors :
Bučinský L
Jayatilaka D
Grabowsky S
Source :
Acta crystallographica. Section A, Foundations and advances [Acta Crystallogr A Found Adv] 2019 Sep 01; Vol. 75 (Pt 5), pp. 705-717. Date of Electronic Publication: 2019 Aug 12.
Publication Year :
2019

Abstract

Quantum crystallographic refinement of heavy-element-containing compounds is a challenge, because many physical effects have to be accounted for adequately. Here, the impact and magnitude of relativistic effects are compared with those of electron correlation, polarization through the environment, choice of basis set and treatment of thermal motion effects on the structure factors of diphenylmercury(II) [Hg(Ph) <subscript>2</subscript> ] and dicyanomercury(II) [Hg(CN) <subscript>2</subscript> ]. Furthermore, the individual atomic contributions to the structure factors are explored in detail (using Mulliken population analysis and the exponential decay of atomic displacement parameters) to compare the contributions of lighter atoms, especially hydrogen atoms, against mercury. Subsequently, relativistic Hirshfeld atom refinement (HAR) is validated against theoretical structure factors of Hg(Ph) <subscript>2</subscript> and Hg(CN) <subscript>2</subscript> , starting from perturbed geometries, to test if the relativistic variant of HAR leads to multiple solutions. Generally, relativistic HAR is successful, leading to a perfect match with the reference geometries, but some limitations are pointed out.

Details

Language :
English
ISSN :
2053-2733
Volume :
75
Issue :
Pt 5
Database :
MEDLINE
Journal :
Acta crystallographica. Section A, Foundations and advances
Publication Type :
Academic Journal
Accession number :
31475915
Full Text :
https://doi.org/10.1107/S2053273319008027