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iTRAQ-based proteomic analysis discovers potential biomarkers of diffuse axonal injury in rats.
- Source :
-
Brain research bulletin [Brain Res Bull] 2019 Nov; Vol. 153, pp. 289-304. Date of Electronic Publication: 2019 Sep 17. - Publication Year :
- 2019
-
Abstract
- Diffuse axonal injury (DAI) is one of the most common and severe pathological consequences of traumatic brain injury (TBI). The molecular mechanism of DAI is highly complicated and still elusive, yet a clear understanding is crucial for the diagnosis, treatment, and prognosis of DAI. In our study, we used rats to establish a DAI model and applied isobaric tags for relative and absolute quantitation (iTRAQ) coupled with liquid chromatography-tandem mass spectrometry (LC-MS/MS) analysis to identify differentially expressed proteins (DEPs) in the corpus callosum. As a result, a total of 514 proteins showed differential expression between the injury groups and the control. Among these DEPs, 14 common DEPs were present at all seven time points postinjury (1, 3, 6, 12, 24, 48, and 72 h). Next, bioinformatic analysis was performed to elucidate the pathogenesis of DAI, which was found to possibly involve calcium ion-regulatory proteins (e.g., calsenilin and ryanodine receptor 2), cytoskeleton organization (e.g., peripherin, NFL, NFM, and NFH), apoptotic processes (e.g., calsenilin and protein kinase C delta type), and inflammatory response proteins (e.g., complement C3 and C-reactive protein). Moreover, peripherin and calsenilin were successfully confirmed by western blotting to be significantly upregulated during DAI, and immunohistochemical (IHC) analysis revealed that their expression increased and could be observed in axons after injury, thus indicating their potential as DAI biomarkers. Our experiments not only provide insight into the molecular mechanisms of axonal injury in rats during DAI but also give clinicians and pathologists important reference data for the diagnosis of DAI. Our findings may expand the list of DAI biomarkers and improve the postmortem diagnostic rate of DAI.<br /> (Copyright © 2019 Elsevier Inc. All rights reserved.)
- Subjects :
- Animals
Axons metabolism
Biomarkers metabolism
Brain metabolism
Brain Injuries, Traumatic pathology
Chromatography, Liquid methods
Computational Biology methods
Corpus Callosum metabolism
Female
Prognosis
Proteomics methods
Rats
Rats, Sprague-Dawley
Tandem Mass Spectrometry methods
Diffuse Axonal Injury diagnosis
Diffuse Axonal Injury metabolism
Diffuse Axonal Injury pathology
Subjects
Details
- Language :
- English
- ISSN :
- 1873-2747
- Volume :
- 153
- Database :
- MEDLINE
- Journal :
- Brain research bulletin
- Publication Type :
- Academic Journal
- Accession number :
- 31539556
- Full Text :
- https://doi.org/10.1016/j.brainresbull.2019.09.004