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Flavobacterium psychrotolerans sp. nov., a psychrotolerant bacterium isolated from Renlongba glacier on the Tibetan Plateau.
- Source :
-
International journal of systematic and evolutionary microbiology [Int J Syst Evol Microbiol] 2020 Feb; Vol. 70 (2), pp. 1031-1036. - Publication Year :
- 2020
-
Abstract
- One aerobic, Gram-stain-negative, rod-shaped bacterium, designated strain RB1R5 <superscript>T</superscript> , was isolated from Renlongba glacier in Tibet Autonomous Region, China. Growth was observed at 4-25 °C and pH 7.0-8.0. Phylogenetic analysis based on 16S rRNA gene sequences revealed that strain RB1R5 <superscript>T</superscript> belongs to the genus Flavobacterium , and its closest relatives are Flavobacterium luteum IMCC26026 <superscript>T</superscript> and Flavobacterium psychroterrae CCM 8827 <superscript>T</superscript> with 97.75 and 97.42% gene sequence similarities, respectively. The average nucleotide identity and DNA-DNA hybridization values between strain RB1R5 <superscript>T</superscript> and its closest relative Flavobacterium luteum IMCC26026 <superscript>T</superscript> were 78.02 and 21.8 %, respectively. The major cellular fatty acids were anteiso-C <subscript>15 : 0</subscript> and summed feature 3 (comprising C <subscript>16:1</subscript> ω7 c /C <subscript>16:1</subscript> ω6 c ). The sole menaquinone was MK-6. The major phospholipid was phosphatidylethanolamine. On the basis of phenotypic, phylogenetic and chemotaxonomic characterizations, strain RB1R5 <superscript>T</superscript> represents a novel species of the genus Flavobacterium , for which the name Flavobacterium psychrotolerans sp. nov. is proposed. The type strain is RB1R5 <superscript>T</superscript> (=CGMCC 1.23024 <superscript>T</superscript> =NBRC 113060 <superscript>T</superscript> ).
- Subjects :
- Bacterial Typing Techniques
Base Composition
China
DNA, Bacterial genetics
Fatty Acids chemistry
Flavobacterium isolation & purification
Nucleic Acid Hybridization
Phospholipids chemistry
RNA, Ribosomal, 16S genetics
Sequence Analysis, DNA
Tibet
Vitamin K 2 analogs & derivatives
Vitamin K 2 chemistry
Flavobacterium classification
Ice Cover microbiology
Phylogeny
Subjects
Details
- Language :
- English
- ISSN :
- 1466-5034
- Volume :
- 70
- Issue :
- 2
- Database :
- MEDLINE
- Journal :
- International journal of systematic and evolutionary microbiology
- Publication Type :
- Academic Journal
- Accession number :
- 31702532
- Full Text :
- https://doi.org/10.1099/ijsem.0.003868