Back to Search
Start Over
Ktedonosporobacter rubrisoli gen. nov., sp. nov., a novel representative of the class Ktedonobacteria , isolated from red soil, and proposal of Ktedonosporobacteraceae fam. nov.
- Source :
-
International journal of systematic and evolutionary microbiology [Int J Syst Evol Microbiol] 2020 Feb; Vol. 70 (2), pp. 1015-1025. - Publication Year :
- 2020
-
Abstract
- A novel filamentous, spore-forming, Gram-stain-positive bacterium, designated SCAWS-G2 <superscript>T</superscript> , was isolated from red soil in Jiangxi Province, PR China. The strain grew at 25-45 °C and at pH 4.0-7.0, and was able to tolerate up to 50 mM Zn <superscript>2+</superscript> . The complete genome of strain SCAWS-G2 <superscript>T</superscript> was a circular chromosome of ~11.34 Mb, which contained four 16S rRNA genes with three sequence types (0.4-0.8 % differences). Phylogenetic analysis based on 16S rRNA gene sequences showed that strain SCAWS-G2 <superscript>T</superscript> formed a distinct lineage within the order Ktedonobacterales , showing <89.2 % sequence similarities to the recognized taxa of this order. The whole-genome based phylogenomic tree separated strain SCAWS-G2 <superscript>T</superscript> from the recognized families within Ktedonobacterales . The genome-wide average nucleotide identity values between strain SCAWS-G2 <superscript>T</superscript> and the related type strains were <68.2 %. The strain can also be differentiated from the recognized families by a number of phenotypic characteristics. The polar lipids of SCAWS-G2 <superscript>T</superscript> were diphosphatidylglycerol, phosphatidylglycerol, phosphatidylinositol, seven unidentified glycolipids and one unidentified lipid. The peptidoglycan amino acids contained ornithine, glycine, glutamic acid and alanine, and the cell-wall sugars were mainly galactose and rhamnose. The major fatty acids were C <subscript>16 : 1</subscript> 2-OH, C <subscript>16 : 0</subscript> and iso-C <subscript>17 : 0</subscript> . Based on all these data, we propose that strain SCAWS-G2 <superscript>T</superscript> represents a novel genus and species, Ktedonosporobacter rubrisoli gen. nov., sp. nov., within the new family Ktedonosporobacteraceae fam. nov. of the order Ktedonobacterales . The type strain of Ktedonosporobacter rubrisoli is SCAWS-G2 <superscript>T</superscript> (=CGMCC 1.16132 <superscript>T</superscript> =DSM 105258 <superscript>T</superscript> ).
- Subjects :
- Bacterial Typing Techniques
Base Composition
Cell Wall chemistry
China
Chloroflexi isolation & purification
DNA, Bacterial genetics
Fatty Acids chemistry
Glycolipids chemistry
Peptidoglycan chemistry
Phospholipids chemistry
RNA, Ribosomal, 16S genetics
Sequence Analysis, DNA
Chloroflexi classification
Phylogeny
Soil Microbiology
Subjects
Details
- Language :
- English
- ISSN :
- 1466-5034
- Volume :
- 70
- Issue :
- 2
- Database :
- MEDLINE
- Journal :
- International journal of systematic and evolutionary microbiology
- Publication Type :
- Academic Journal
- Accession number :
- 31730027
- Full Text :
- https://doi.org/10.1099/ijsem.0.003864