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The Iberian legacy into a young genetic xeroderma pigmentosum cluster in central Brazil.
- Source :
-
Mutation research. Genetic toxicology and environmental mutagenesis [Mutat Res Genet Toxicol Environ Mutagen] 2020 Apr; Vol. 852, pp. 503164. Date of Electronic Publication: 2020 Feb 29. - Publication Year :
- 2020
-
Abstract
- In central Brazil, in the municipality of Faina (state of Goiás), the small and isolated village of Araras comprises a genetic cluster of xeroderma pigmentosum (XP) patients. The high level of consanguinity and the geographical isolation gave rise to a high frequency of XP patients. Recently, two founder events were identified affecting that community, with two independent mutations at the POLH gene, c.764 + 1 G > A (intron 6) and c.907 C > T; p.Arg303* (exon 8). These deleterious mutations lead to the xeroderma pigmentosum variant syndrome (XP-V). Previous reports identified both mutations in other countries: the intron 6 mutation in six patients (four families) from Northern Spain (Basque Country and Cantabria) and the exon 8 mutation in two patients from different families in Europe, one of them from Kosovo. In order to investigate the ancestry of the XP patients and the age for these mutations at Araras, we generated genotyping information for 22 XP-V patients from Brazil (16), Spain (6) and Kosovo (1). The local genomic ancestry and the shared haplotype segments among the patients showed that the intron 6 mutation at Araras is associated with an Iberian genetic legacy. All patients from Goiás, homozygotes for intron 6 mutation, share with the Spanish patients identical-by-descent (IBD) genomic segments comprising the mutation. The entrance date for the Iberian haplotype at the village was calculated to be approximately 200 years old. This result is in agreement with the historical arrival of Iberian individuals at the Goiás state (BR). Patients from Goiás and the three families from Spain share 1.8 cM (family 14), 1.7 cM (family 15), and a more significant segment of 4.7 cM within family 13. On the other hand, the patients carrying the exon 8 mutation do not share any specific genetic segment, indicating an old genetic distance between them or even no common ancestry.<br />Competing Interests: Declarations of Competing Interest The authors declare no competing or conflict interests.<br /> (Copyright © 2020 Elsevier B.V. All rights reserved.)
- Subjects :
- Brazil epidemiology
Consanguinity
Europe epidemiology
Exons
Female
Genetics, Population
Heterozygote
Homozygote
Human Migration
Humans
Introns
Male
Phenotype
Xeroderma Pigmentosum epidemiology
Xeroderma Pigmentosum pathology
DNA-Directed DNA Polymerase genetics
Haplotypes
Inheritance Patterns
Mutation
Reproductive Isolation
Xeroderma Pigmentosum genetics
Subjects
Details
- Language :
- English
- ISSN :
- 1879-3592
- Volume :
- 852
- Database :
- MEDLINE
- Journal :
- Mutation research. Genetic toxicology and environmental mutagenesis
- Publication Type :
- Academic Journal
- Accession number :
- 32265042
- Full Text :
- https://doi.org/10.1016/j.mrgentox.2020.503164