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Rational targeting of Wzb phosphatase and Wzc kinase interaction inhibits extracellular polysaccharides synthesis and biofilm formation in Acinetobacter baumannii.
- Source :
-
Carbohydrate research [Carbohydr Res] 2020 Jun; Vol. 492, pp. 108025. Date of Electronic Publication: 2020 May 01. - Publication Year :
- 2020
-
Abstract
- Acinetobacter baumannii is an opportunistic nosocomial pathogen, and responsible for high mortality and morbidity. Biofilm formation is one of the resistance determinants, where extracellular polysaccharide (EPS) is an essential component. EPS synthesis and its export is regulated by the bacterial Wza-Wzb-Wzc system. Wzc exhibits auto-phosphorylation protein tyrosine kinase activity, while Wzb is a protein tyrosine phosphatase. Wzb mediates dephosphorylation of Wzc. Dephosphorylated Wzc is required for the export of the EPS through porin Wza-Wzc complex. It shows that the interaction of Wzb with Wzc is critical for the export of EPS. Therefore, if the Wzb-Wzc interaction is inhibited, then it might hinder the EPS transport and diminish the biofilm formation. In this study, we have modelled the Wzb, and Wzc proteins and further validated using PSVS, ProSA, RAMPAGE, and PDBsum. The modelled proteins were used for protein-protein docking. The docked protein-protein complex was minimized by Schrodinger software using OPLS&#95;2005 force field. The binding site of the minimized Wzb-Wzc complex was identified by Sitemap. The high throughput virtual screening identified Labetalol hydrochloride and 4-{1-hydroxy-2-[(1-methyl-3-phenylpropyl) amino] propyl} phenol from FDA-approved drug library based on their interaction at the interface of Wzb-Wzc complex. The inhibitor-protein complex was further undergone molecular mechanics analysis using Generalized Born model and Solvent Accessibility (MMGBSA) to estimate the binding free energies. The lead was also used to generate the pharmacophore model and screening the molecule with antimicrobial scaffold. The identified lead was experimentally validated for its effect on EPS quantity and biofilm formation by A. baumannii. Wzb-Wzc interaction is essential for biofilm and EPS export; hence, the identified lead might be useful to regulate the biofilm formation by A. baumannii.<br />Competing Interests: Declaration of competing interest The authors declare that they have no known competing financial interests or personal relationships that could have appeared to influence the work reported in this paper.<br /> (Copyright © 2020 Elsevier Ltd. All rights reserved.)
- Subjects :
- Acinetobacter baumannii metabolism
Anti-Bacterial Agents chemistry
Labetalol chemistry
Microbial Sensitivity Tests
Models, Molecular
Molecular Conformation
Phenols chemistry
Polysaccharides biosynthesis
Protein Binding drug effects
Protein Tyrosine Phosphatases chemistry
Protein Tyrosine Phosphatases metabolism
Protein-Tyrosine Kinases chemistry
Protein-Tyrosine Kinases metabolism
Acinetobacter baumannii drug effects
Anti-Bacterial Agents pharmacology
Biofilms drug effects
Labetalol pharmacology
Phenols pharmacology
Polysaccharides antagonists & inhibitors
Protein Tyrosine Phosphatases antagonists & inhibitors
Protein-Tyrosine Kinases antagonists & inhibitors
Subjects
Details
- Language :
- English
- ISSN :
- 1873-426X
- Volume :
- 492
- Database :
- MEDLINE
- Journal :
- Carbohydrate research
- Publication Type :
- Academic Journal
- Accession number :
- 32402850
- Full Text :
- https://doi.org/10.1016/j.carres.2020.108025