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Investigating the Product Profiles and Structural Relationships of New Levansucrases with Conventional and Non-Conventional Substrates.
- Source :
-
International journal of molecular sciences [Int J Mol Sci] 2020 Jul 29; Vol. 21 (15). Date of Electronic Publication: 2020 Jul 29. - Publication Year :
- 2020
-
Abstract
- The synthesis of complex oligosaccharides is desired for their potential as prebiotics, and their role in the pharmaceutical and food industry. Levansucrase (LS, EC 2.4.1.10), a fructosyl-transferase, can catalyze the synthesis of these compounds. LS acquires a fructosyl residue from a donor molecule and performs a non-Lenoir transfer to an acceptor molecule, via β-(2→6)-glycosidic linkages. Genome mining was used to uncover new LS enzymes with increased transfructosylating activity and wider acceptor promiscuity, with an initial screening revealing five LS enzymes. The product profiles and activities of these enzymes were examined after their incubation with sucrose. Alternate acceptor molecules were also incubated with the enzymes to study their consumption. LSs from Gluconobacter oxydans and Novosphingobium aromaticivorans synthesized fructooligosaccharides (FOSs) with up to 13 units in length. Alignment of their amino acid sequences and substrate docking with homology models identified structural elements causing differences in their product spectra. Raffinose, over sucrose, was the preferred donor molecule for the LS from Vibrio natriegens, N. aromaticivorans , and Paraburkolderia graminis . The LSs examined were found to have wide acceptor promiscuity, utilizing monosaccharides, disaccharides, and two alcohols to a high degree.
- Subjects :
- Amino Acid Sequence
Binding Sites
Biocatalysis
Burkholderiaceae chemistry
Burkholderiaceae enzymology
Fructans biosynthesis
Fructose metabolism
Gene Expression
Gluconobacter oxydans chemistry
Hexosyltransferases genetics
Hexosyltransferases metabolism
Humans
Kinetics
Molecular Docking Simulation
Oligosaccharides biosynthesis
Prebiotics analysis
Protein Binding
Protein Conformation
Raffinose chemistry
Raffinose metabolism
Recombinant Proteins chemistry
Recombinant Proteins genetics
Recombinant Proteins metabolism
Sequence Alignment
Sphingomonadaceae chemistry
Structural Homology, Protein
Substrate Specificity
Sucrose chemistry
Sucrose metabolism
Vibrio chemistry
Vibrio enzymology
Fructans chemistry
Fructose chemistry
Gluconobacter oxydans enzymology
Hexosyltransferases chemistry
Oligosaccharides chemistry
Sphingomonadaceae enzymology
Subjects
Details
- Language :
- English
- ISSN :
- 1422-0067
- Volume :
- 21
- Issue :
- 15
- Database :
- MEDLINE
- Journal :
- International journal of molecular sciences
- Publication Type :
- Academic Journal
- Accession number :
- 32751348
- Full Text :
- https://doi.org/10.3390/ijms21155402