Whole genome sequence data of Lactobacillus fermentum HFD1, the producer of antibacterial peptides.

Authors :: Ozhegov GD
Pavlova AS
Zhuravleva DE
Gogoleva NE
Shagimardanova EI
Markelova MI
Yarullina DR
Kayumov AR
Source :: Data in brief [Data Brief] 2020 Aug 01; Vol. 32, pp. 106105. Date of Electronic Publication: 2020 Aug 01 (Print Publication: 2020).
Publication Year :: 2020
Abstract: Here we report the whole genome sequence of Lactobacillus fermentum HFD1 strain, the producer of antibacterial peptides. The genome consists of one circular chromosome with 2101878 bp in length and GC-content of 51.8%, and includes linear DNA with 5386 bp in length with 100% identity to bacteriophage phiX174. The analysis of the genome has revealed 2049 genes encoding for proteins including 867 proteins without known function and 70 genes encoding for RNAs (10 rRNAs, 59 tRNAs and 1 tmRNA). Putative genes responsible for the biosynthesis of 4 antimicrobial peptides were identified. The NCBI Bioproject has been deposited at NCBI under the accession number PRJNA615901 (https://www.ncbi.nlm.nih.gov/bioproject/PRJNA615901/) and consist of full annotated genome and raw sequence data.<br />Competing Interests: Authors declare no conflicts of interests.<br /> (© 2020 The Author(s).)

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