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A multi-ethnic meta-analysis identifies novel genes, including ACSL5, associated with amyotrophic lateral sclerosis.

Authors :
Nakamura R
Misawa K
Tohnai G
Nakatochi M
Furuhashi S
Atsuta N
Hayashi N
Yokoi D
Watanabe H
Watanabe H
Katsuno M
Izumi Y
Kanai K
Hattori N
Morita M
Taniguchi A
Kano O
Oda M
Shibuya K
Kuwabara S
Suzuki N
Aoki M
Ohta Y
Yamashita T
Abe K
Hashimoto R
Aiba I
Okamoto K
Mizoguchi K
Hasegawa K
Okada Y
Ishihara T
Onodera O
Nakashima K
Kaji R
Kamatani Y
Ikegawa S
Momozawa Y
Kubo M
Ishida N
Minegishi N
Nagasaki M
Sobue G
Source :
Communications biology [Commun Biol] 2020 Sep 23; Vol. 3 (1), pp. 526. Date of Electronic Publication: 2020 Sep 23.
Publication Year :
2020

Abstract

Amyotrophic lateral sclerosis (ALS) is a devastating progressive motor neuron disease that affects people of all ethnicities. Approximately 90% of ALS cases are sporadic and thought to have multifactorial pathogenesis. To understand the genetics of sporadic ALS, we conducted a genome-wide association study using 1,173 sporadic ALS cases and 8,925 controls in a Japanese population. A combined meta-analysis of our Japanese cohort with individuals of European ancestry revealed a significant association at the ACSL5 locus (top SNP p = 2.97 × 10 <superscript>-8</superscript> ). We validated the association with ACSL5 in a replication study with a Chinese population and an independent Japanese population (1941 ALS cases, 3821 controls; top SNP p = 1.82 × 10 <superscript>-4</superscript> ). In the combined meta-analysis, the intronic ACSL5 SNP rs3736947 showed the strongest association (p = 7.81 × 10 <superscript>-11</superscript> ). Using a gene-based analysis of the full multi-ethnic dataset, we uncovered additional genes significantly associated with ALS: ERGIC1, RAPGEF5, FNBP1, and ATXN3. These results advance our understanding of the genetic basis of sporadic ALS.

Details

Language :
English
ISSN :
2399-3642
Volume :
3
Issue :
1
Database :
MEDLINE
Journal :
Communications biology
Publication Type :
Academic Journal
Accession number :
32968195
Full Text :
https://doi.org/10.1038/s42003-020-01251-2