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mRNA profiling of mock casework samples: Results of a FoRNAP collaborative exercise.
- Source :
-
Forensic science international. Genetics [Forensic Sci Int Genet] 2021 Jan; Vol. 50, pp. 102409. Date of Electronic Publication: 2020 Oct 26. - Publication Year :
- 2021
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Abstract
- In recent years, forensic mRNA profiling has increasingly been used to identify the origin of human body fluids. By now, several laboratories have implemented mRNA profiling and also use it in criminal casework. In 2018 the FoRNAP (Forensic RNA Profiling) group was established among a number of these laboratories with the aim of sharing experiences, discussing optimization potential, identifying challenges and suggesting solutions with regards to mRNA profiling and casework. To compare mRNA profiling methods and results a collaborative exercise was organized within the FoRNAP group. Seven laboratories from four countries received 16 stains, comprising six pure body fluid / tissue stains and ten mock casework samples. The laboratories were asked to analyze the provided stains with their in-house method (PCR/CE or MPS) and markers of choice. Five laboratories used a DNA/RNA co-extraction strategy. Overall, up to 11 mRNA markers per body fluid were analyzed. We found that mRNA profiling using different extraction and analysis methods as well as different multiplexes can be applied to casework-like samples. In general, high input samples were typed with high accuracy by all laboratories, regardless of the method used. Irrespective of the analysis strategy, samples of low input or mixed stains were more challenging to analyze and interpret since, alike to DNA profiling, a higher number of markers dropped out and/or additional unexpected markers not consistent with the cell type in question were detected. It could be shown that a plethora of different but valid analysis and interpretation strategies exist and are successfully applied in the Forensic Genetics community. Nevertheless, efforts aiming at optimizing and harmonizing interpretation approaches in order to achieve a higher consistency between laboratories might be desirable in the future. The simultaneous extraction of DNA alongside RNA showed to be an effective approach to identify not only the body fluid present but also to identify the donor(s) of the stain. This allows investigators to gain valuable information about the origin of crime scene samples and the course of events in a crime case.<br /> (Copyright © 2020 The Authors. Published by Elsevier B.V. All rights reserved.)
- Subjects :
- Blood Chemical Analysis
Cervix Mucus chemistry
DNA analysis
Electrophoresis, Capillary
Genetic Markers
High-Throughput Nucleotide Sequencing
Humans
Menstruation
Microsatellite Repeats
Polymerase Chain Reaction
Saliva chemistry
Semen chemistry
Skin chemistry
Forensic Genetics methods
Laboratories
RNA, Messenger genetics
Subjects
Details
- Language :
- English
- ISSN :
- 1878-0326
- Volume :
- 50
- Database :
- MEDLINE
- Journal :
- Forensic science international. Genetics
- Publication Type :
- Academic Journal
- Accession number :
- 33220528
- Full Text :
- https://doi.org/10.1016/j.fsigen.2020.102409