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Aeromicrobium terrae sp. nov., isolated from a maize field.
- Source :
-
International journal of systematic and evolutionary microbiology [Int J Syst Evol Microbiol] 2021 Feb; Vol. 71 (2). - Publication Year :
- 2021
-
Abstract
- A polyphasic taxonomic approach was used to characterize a Gram-stain-positive bacterium, designated strain CC-CFT486 <superscript>T</superscript> , isolated from soil sampled in a maize field in Taiwan. Cells of strain CC-CFT486 <superscript>T</superscript> were short rods, motile with polar flagella, catalase-positive and oxidase-positive. Optimal growth occurred at 30 °С, pH 8 and 1 % NaCl. Phylogenetic analyses based on 16S rRNA genes revealed a distinct taxonomic position attained by strain CC-CFT486 <superscript>T</superscript> associated with Aeromicrobium panacisoli (97.0 % sequence identity), Aeromicrobium lacus (97.0 %), Aeromicrobium erythreum (96.8 %) and Aeromicrobium alkaliterrae (96.8 %), and lower sequence similarity values to other species. Average nucleotide identity (ANI) values were 70.6-77.8 % ( n =11) compared within the type strains of the genus Aeromicrobium . Strain CC-CFT486 <superscript>T</superscript> contained C <subscript>16 : 0</subscript> , C <subscript>17 : 0</subscript> , C <subscript>17 : 1</subscript> ω 8c and C <subscript>18 : 1</subscript> ω 9c as the predominant fatty acids. The polar lipid profile consisted of diphosphatidylglycerol, phosphatidylethanolamine, phosphatidylglycerol, phosphatidylinositol, two unidentified aminophospholipids and three unknown phospholipids. The cell wall peptidoglycan of strains CC-CFT486 <superscript>T</superscript> contained ll-diaminopimelic acid (ll-DAP) and the major polyamine was spermidine. The DNA G+C content was 70.6 mol% and the predominant quinone was menaquinone 9 (MK-9). Based on its distinct phylogenetic, phenotypic and chemotaxonomic traits together with results of comparative 16S rRNA gene sequence and ANI analyses, strain CC-CFT486 <superscript>T</superscript> is proposed to represent a novel Aeromicrobium species, for which the name Aeromicrobium terrae sp. nov. (type strain CC-CFT486 <superscript>T</superscript> =BCRC 81217 <superscript>T</superscript> =JCM 33499 <superscript>T</superscript> ).
- Subjects :
- Actinobacteria isolation & purification
Bacterial Typing Techniques
Base Composition
DNA, Bacterial genetics
Diaminopimelic Acid chemistry
Fatty Acids chemistry
Peptidoglycan chemistry
Phospholipids chemistry
RNA, Ribosomal, 16S genetics
Sequence Analysis, DNA
Spermidine chemistry
Taiwan
Vitamin K 2 analogs & derivatives
Vitamin K 2 chemistry
Actinobacteria classification
Phylogeny
Soil Microbiology
Zea mays microbiology
Subjects
Details
- Language :
- English
- ISSN :
- 1466-5034
- Volume :
- 71
- Issue :
- 2
- Database :
- MEDLINE
- Journal :
- International journal of systematic and evolutionary microbiology
- Publication Type :
- Academic Journal
- Accession number :
- 33400640
- Full Text :
- https://doi.org/10.1099/ijsem.0.004616