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Identification of drug combinations on the basis of machine learning to maximize anti-aging effects.

Authors :
Kim SK
Goughnour PC
Lee EJ
Kim MH
Chae HJ
Yun GY
Kim YR
Choi JW
Source :
PloS one [PLoS One] 2021 Jan 28; Vol. 16 (1), pp. e0246106. Date of Electronic Publication: 2021 Jan 28 (Print Publication: 2021).
Publication Year :
2021

Abstract

Aging is a multifactorial process that involves numerous genetic changes, so identifying anti-aging agents is quite challenging. Age-associated genetic factors must be better understood to search appropriately for anti-aging agents. We utilized an aging-related gene expression pattern-trained machine learning system that can implement reversible changes in aging by linking combinatory drugs. In silico gene expression pattern-based drug repositioning strategies, such as connectivity map, have been developed as a method for unique drug discovery. However, these strategies have limitations such as lists that differ for input and drug-inducing genes or constraints to compare experimental cell lines to target diseases. To address this issue and improve the prediction success rate, we modified the original version of expression profiles with a stepwise-filtered method. We utilized a machine learning system called deep-neural network (DNN). Here we report that combinational drug pairs using differential expressed genes (DEG) had a more enhanced anti-aging effect compared with single independent treatments on leukemia cells. This study shows potential drug combinations to retard the effects of aging with higher efficacy using innovative machine learning techniques.<br />Competing Interests: The authors have read the journal’s policy and the authors of this manuscript have the following competing interests: MHK, HJC, GYY, and YRK are paid employees of Oncocross Ltd. There are no patents, products in development or marketing products to declare. This does not alter our adherence to PLOS ONE policies on sharing data and materials.

Details

Language :
English
ISSN :
1932-6203
Volume :
16
Issue :
1
Database :
MEDLINE
Journal :
PloS one
Publication Type :
Academic Journal
Accession number :
33507975
Full Text :
https://doi.org/10.1371/journal.pone.0246106