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The GenTree Platform: growth traits and tree-level environmental data in 12 European forest tree species.

Authors :
Opgenoorth L
Dauphin B
Benavides R
Heer K
Alizoti P
Martínez-Sancho E
Alía R
Ambrosio O
Audrey A
Auñón F
Avanzi C
Avramidou E
Bagnoli F
Barbas E
Bastias CC
Bastien C
Ballesteros E
Beffa G
Bernier F
Bignalet H
Bodineau G
Bouic D
Brodbeck S
Brunetto W
Buchovska J
Buy M
Cabanillas-Saldaña AM
Carvalho B
Cheval N
Climent JM
Correard M
Cremer E
Danusevičius D
Del Caño F
Denou JL
di Gerardi N
Dokhelar B
Ducousso A
Eskild Nilsen A
Farsakoglou AM
Fonti P
Ganopoulos I
García Del Barrio JM
Gilg O
González-Martínez SC
Graf R
Gray A
Grivet D
Gugerli F
Hartleitner C
Hollenbach E
Hurel A
Issehut B
Jean F
Jorge V
Jouineau A
Kappner JP
Kärkkäinen K
Kesälahti R
Knutzen F
Kujala ST
Kumpula TA
Labriola M
Lalanne C
Lambertz J
Lascoux M
Lejeune V
Le-Provost G
Levillain J
Liesebach M
López-Quiroga D
Meier B
Malliarou E
Marchon J
Mariotte N
Mas A
Matesanz S
Meischner H
Michotey C
Milesi P
Morganti S
Nievergelt D
Notivol E
Ostreng G
Pakull B
Perry A
Piotti A
Plomion C
Poinot N
Pringarbe M
Puzos L
Pyhäjärvi T
Raffin A
Ramírez-Valiente JA
Rellstab C
Remi D
Richter S
Robledo-Arnuncio JJ
San Segundo S
Savolainen O
Schueler S
Schneck V
Scotti I
Semerikov V
Slámová L
Sønstebø JH
Spanu I
Thevenet J
Tollefsrud MM
Turion N
Vendramin GG
Villar M
von Arx G
Westin J
Fady B
Myking T
Valladares F
Aravanopoulos FA
Cavers S
Source :
GigaScience [Gigascience] 2021 Mar 18; Vol. 10 (3).
Publication Year :
2021

Abstract

Background: Progress in the field of evolutionary forest ecology has been hampered by the huge challenge of phenotyping trees across their ranges in their natural environments, and the limitation in high-resolution environmental information.<br />Findings: The GenTree Platform contains phenotypic and environmental data from 4,959 trees from 12 ecologically and economically important European forest tree species: Abies alba Mill. (silver fir), Betula pendula Roth. (silver birch), Fagus sylvatica L. (European beech), Picea abies (L.) H. Karst (Norway spruce), Pinus cembra L. (Swiss stone pine), Pinus halepensis Mill. (Aleppo pine), Pinus nigra Arnold (European black pine), Pinus pinaster Aiton (maritime pine), Pinus sylvestris L. (Scots pine), Populus nigra L. (European black poplar), Taxus baccata L. (English yew), and Quercus petraea (Matt.) Liebl. (sessile oak). Phenotypic (height, diameter at breast height, crown size, bark thickness, biomass, straightness, forking, branch angle, fructification), regeneration, environmental in situ measurements (soil depth, vegetation cover, competition indices), and environmental modeling data extracted by using bilinear interpolation accounting for surrounding conditions of each tree (precipitation, temperature, insolation, drought indices) were obtained from trees in 194 sites covering the species' geographic ranges and reflecting local environmental gradients.<br />Conclusion: The GenTree Platform is a new resource for investigating ecological and evolutionary processes in forest trees. The coherent phenotyping and environmental characterization across 12 species in their European ranges allow for a wide range of analyses from forest ecologists, conservationists, and macro-ecologists. Also, the data here presented can be linked to the GenTree Dendroecological collection, the GenTree Leaf Trait collection, and the GenTree Genomic collection presented elsewhere, which together build the largest evolutionary forest ecology data collection available.<br /> (© The Author(s) 2021. Published by Oxford University Press GigaScience.)

Details

Language :
English
ISSN :
2047-217X
Volume :
10
Issue :
3
Database :
MEDLINE
Journal :
GigaScience
Publication Type :
Academic Journal
Accession number :
33734368
Full Text :
https://doi.org/10.1093/gigascience/giab010