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MiRNA based tumor mutation burden diagnostic and prognostic prediction models for endometrial cancer.
- Source :
-
Bioengineered [Bioengineered] 2021 Dec; Vol. 12 (1), pp. 3603-3620. - Publication Year :
- 2021
-
Abstract
- Uterus Corpus Endometrial cancer (UCEC) is the sixth most common malignant tumor worldwide. In this research, we identified diagnostic and prognostic biomarkers to reflect patients' immune microenvironment and prognostic. Various data of UCEC patients from the TCGA database were obtained. Firstly, patients were divided into a high tumor mutation burden (TMB) level group and a low TMB level group according to the level of TMB. Then, differentially expressed miRNAs between the two groups were obtained. LASSO logistic regression analysis was used to construct a diagnostic model to predict the level of TMB. Univariate, multivariate, and LASSO regression analysis were used to construct a prognostic risk signature (PRS) to predict the prognosis of UCEC patients. Twenty-one miRNAs were used to construct a diagnostic model for predicting TMB levels. The AUC values of ROC curves for 21-miRNA-based diagnostic models were 0.911 in the training set, 0.827 in the test set, and 0.878 in the entire set. This diagnostic model showed positive correlation with TMB, PDL1 expression, and the infiltration of immune cells. In addition, three prognostic miRNAs were finally used to construct the PRS. The PRS was related to the expression of multiple immune checkpoints and the infiltration of multiple immune cells. Furthermore, the PRS can also reflect the response to some commonly used chemotherapy regimens. We have established a miRNA-based diagnostic model and a prognostic model that can predict the prognosis of UCEC patients and their response to chemotherapy and immunotherapy, thus providing valuable information on the choice of treatment regimen.
- Subjects :
- Biomarkers, Tumor genetics
Biomarkers, Tumor metabolism
Computational Biology
Databases, Genetic
Female
Humans
Immunotherapy
MicroRNAs metabolism
Middle Aged
Prognosis
Transcriptome genetics
Endometrial Neoplasms diagnosis
Endometrial Neoplasms genetics
Endometrial Neoplasms metabolism
Endometrial Neoplasms mortality
MicroRNAs genetics
Mutation genetics
Subjects
Details
- Language :
- English
- ISSN :
- 2165-5987
- Volume :
- 12
- Issue :
- 1
- Database :
- MEDLINE
- Journal :
- Bioengineered
- Publication Type :
- Academic Journal
- Accession number :
- 34252354
- Full Text :
- https://doi.org/10.1080/21655979.2021.1947940