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Halobaculum halophilum sp. nov. and Halobaculum salinum sp. nov., isolated from salt lake and saline soil.

Authors :
Cui HL
Shi XW
Yin XM
Yang XY
Hou J
Zhu L
Source :
International journal of systematic and evolutionary microbiology [Int J Syst Evol Microbiol] 2021 Jul; Vol. 71 (7).
Publication Year :
2021

Abstract

Two halophilic archaeal strains, Gai3-2 <superscript>T</superscript> and NJ-3-1 <superscript>T</superscript> , were isolated from salt lake and saline soil samples, respectively, collected in PR China. The 16S rRNA gene sequences of the two strains were 97.5% similar to each other. Strains Gai3-2 <superscript>T</superscript> and NJ-3-1 <superscript>T</superscript> had the highest sequence similarities to ' Halobonum tyrrellense ' G22 (96.7 and 97.8%, respectively), and displayed similarities of 91.5-93.5% and 92.3-94.7%, respectively, to Halobaculum members. Phylogenetic analysis revealed that the two strains formed different branches and clustered tightly with ' H. tyrrellense ' G22 and Halobaculum members. The average nucleotide identity (ANI), in silico DNA-DNA hybridization ( is DDH) and amino acid identity (AAI) values between the two strains were 83.1, 26.9 and 77.9%, respectively, much lower than the threshold values proposed as a species boundary. These values between the two strains and ' H. tyrrellense ' G22 (ANI 77.9-78.2%, is DDH 22.5-22.6% and AAI 68.8-69.3%) and Halobaculum members (ANI 77.53-77.63%, is DDH 21.8-22.3% and AAI 68.4-69.4%) were almost identical, and much lower than the recommended threshold values for species delimitation. These results suggested that strains Gai3-2 <superscript>T</superscript> and NJ-3-1 <superscript>T</superscript> represent two novel species of Halobaculum . Based on phenotypic, chemotaxonomic and phylogenetic properties, strains Gai3-2 <superscript>T</superscript> (=CGMCC 1.16080 <superscript>T</superscript> =JCM 33550 <superscript>T</superscript> ) and NJ-3-1 <superscript>T</superscript> (=CGMCC 1.16040 <superscript>T</superscript> =JCM 33552 <superscript>T</superscript> ) represent two novel species of the genus Halobaculum , for which the name Halobaculum halophilum sp. nov. and Halobaculum salinum sp. nov. are proposed.

Details

Language :
English
ISSN :
1466-5034
Volume :
71
Issue :
7
Database :
MEDLINE
Journal :
International journal of systematic and evolutionary microbiology
Publication Type :
Academic Journal
Accession number :
34283016
Full Text :
https://doi.org/10.1099/ijsem.0.004900