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Scoring System Based on RNA Modification Writer-Related Genes to Predict Overall Survival and Therapeutic Response in Bladder Cancer.
- Source :
-
Frontiers in immunology [Front Immunol] 2021 Aug 26; Vol. 12, pp. 724541. Date of Electronic Publication: 2021 Aug 26 (Print Publication: 2021). - Publication Year :
- 2021
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Abstract
- Introduction: It's widely reported the "writer" enzymes mediated RNA adenosine modifications which is known as a crucial mechanism of epigenetic regulation in development of tumor and the immunologic response in many kinds of cancers. However, the potential roles of these writer genes in the progression of bladder cancer (BLCA) remain unclear.<br />Materials and Methods: We comprehensively described the alterations of 26 RNA modification writer genes in BLCA from the genetic and transcriptional fields and identified writer-related genes from four independent datasets. Utilizing least absolute shrinkage and selection operator (LASSO) regression and multivariate Cox regression, we constructed a ten writer-related gene signature. After that, we confirmed the predictive and prognostic value of this signature on another six independent datasets and established a nomogram to forecast the overall survival (OS) and mortality odds of BLCA patients clinically.<br />Results: The writer-related genes signature showed good performance in predicting the OS for BLCA patients. Moreover, the writer-related gene signature was related to EMT-related pathways and immune characteristics. Furthermore, the immune cell infiltration levels of CD8 T cells, cytotoxic cells, M1/2 macrophage cells and tumor mutation burden might be able to predict which patients will benefit from immunotherapy. This could also be reflected by the writer-related gene signature.<br />Conclusions: This signature might play an important role in precision individualized immunotherapy. The present work highlights the crucial clinical implications of RNA modifications and may help developing individualized therapeutic strategies for patients with BLCA.<br />Competing Interests: The authors declare that the research was conducted in the absence of any commercial or financial relationships that could be construed as a potential conflict of interest.<br /> (Copyright © 2021 Zhang, Liu, Wang, Li, Xing and Xiao.)
- Subjects :
- Adult
Aged
Aged, 80 and over
China epidemiology
Databases, Factual
Female
Humans
Male
Middle Aged
Neoplasm Grading
Neoplasm Staging
Predictive Value of Tests
Prognosis
Proportional Hazards Models
RNA-Seq
Risk Assessment methods
Risk Assessment statistics & numerical data
Risk Factors
Survival Analysis
Tumor Microenvironment genetics
Urinary Bladder Neoplasms genetics
Urinary Bladder Neoplasms pathology
Urinary Bladder Neoplasms therapy
Young Adult
Biomarkers, Tumor genetics
Gene Expression Profiling
Gene Expression Regulation, Neoplastic
Urinary Bladder Neoplasms mortality
Subjects
Details
- Language :
- English
- ISSN :
- 1664-3224
- Volume :
- 12
- Database :
- MEDLINE
- Journal :
- Frontiers in immunology
- Publication Type :
- Academic Journal
- Accession number :
- 34512654
- Full Text :
- https://doi.org/10.3389/fimmu.2021.724541