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Simulating the Cortical Microcircuit Significantly Faster Than Real Time on the IBM INC-3000 Neural Supercomputer.

Authors :
Heittmann A
Psychou G
Trensch G
Cox CE
Wilcke WW
Diesmann M
Noll TG
Source :
Frontiers in neuroscience [Front Neurosci] 2022 Jan 20; Vol. 15, pp. 728460. Date of Electronic Publication: 2022 Jan 20 (Print Publication: 2021).
Publication Year :
2022

Abstract

This article employs the new IBM INC-3000 prototype FPGA-based neural supercomputer to implement a widely used model of the cortical microcircuit. With approximately 80,000 neurons and 300 Million synapses this model has become a benchmark network for comparing simulation architectures with regard to performance. To the best of our knowledge, the achieved speed-up factor is 2.4 times larger than the highest speed-up factor reported in the literature and four times larger than biological real time demonstrating the potential of FPGA systems for neural modeling. The work was performed at Jülich Research Centre in Germany and the INC-3000 was built at the IBM Almaden Research Center in San Jose, CA, United States. For the simulation of the microcircuit only the programmable logic part of the FPGA nodes are used. All arithmetic is implemented with single-floating point precision. The original microcircuit network with linear LIF neurons and current-based exponential-decay-, alpha-function- as well as beta-function-shaped synapses was simulated using exact exponential integration as ODE solver method. In order to demonstrate the flexibility of the approach, additionally networks with non-linear neuron models (AdEx, Izhikevich) and conductance-based synapses were simulated, applying Runge-Kutta and Parker-Sochacki solver methods. In all cases, the simulation-time speed-up factor did not decrease by more than a very few percent. It finally turns out that the speed-up factor is essentially limited by the latency of the INC-3000 communication system.<br />Competing Interests: CC and WW were employed by IBM Research Division, Almaden Research Center, San Jose, CA, United States. The remaining authors declare that the research was conducted in the absence of any commercial or financial relationships that could be construed as a potential conflict of interest.<br /> (Copyright © 2022 Heittmann, Psychou, Trensch, Cox, Wilcke, Diesmann and Noll.)

Details

Language :
English
ISSN :
1662-4548
Volume :
15
Database :
MEDLINE
Journal :
Frontiers in neuroscience
Publication Type :
Academic Journal
Accession number :
35126034
Full Text :
https://doi.org/10.3389/fnins.2021.728460