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Determining the effects of loss of function mutations in human cell lines.

Authors :
de Prisco N
Botta S
Lee W
Rezazadeh S
Chemiakine A
Gennarino VA
Source :
STAR protocols [STAR Protoc] 2022 Mar 15; Vol. 3 (2), pp. 101232. Date of Electronic Publication: 2022 Mar 15 (Print Publication: 2022).
Publication Year :
2022

Abstract

Quantifying differences in the amount of protein and mRNA caused by missense mutations in a gene of interest can be challenging, especially when using patient-derived primary cells, which are intrinsically variable. In this protocol, we describe how to culture patient-derived lymphoblast and fibroblast cell lines for later mRNA and protein quantification. We also describe the steps to examine variants of PUM1 in HEK293T cells, but the protocol can be applied to other proteins of interest. For complete details on the use and execution of this protocol, please refer to Gennarino et al. (2018).<br />Competing Interests: The authors declare no competing interests.<br /> (© 2022 The Author(s).)

Details

Language :
English
ISSN :
2666-1667
Volume :
3
Issue :
2
Database :
MEDLINE
Journal :
STAR protocols
Publication Type :
Academic Journal
Accession number :
35310075
Full Text :
https://doi.org/10.1016/j.xpro.2022.101232