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TrackMate 7: integrating state-of-the-art segmentation algorithms into tracking pipelines.

Authors :
Ershov D
Phan MS
Pylvänäinen JW
Rigaud SU
Le Blanc L
Charles-Orszag A
Conway JRW
Laine RF
Roy NH
Bonazzi D
Duménil G
Jacquemet G
Tinevez JY
Source :
Nature methods [Nat Methods] 2022 Jul; Vol. 19 (7), pp. 829-832. Date of Electronic Publication: 2022 Jun 02.
Publication Year :
2022

Abstract

TrackMate is an automated tracking software used to analyze bioimages and is distributed as a Fiji plugin. Here, we introduce a new version of TrackMate. TrackMate 7 is built to address the broad spectrum of modern challenges researchers face by integrating state-of-the-art segmentation algorithms into tracking pipelines. We illustrate qualitatively and quantitatively that these new capabilities function effectively across a wide range of bio-imaging experiments.<br /> (© 2022. The Author(s), under exclusive licence to Springer Nature America, Inc.)

Details

Language :
English
ISSN :
1548-7105
Volume :
19
Issue :
7
Database :
MEDLINE
Journal :
Nature methods
Publication Type :
Academic Journal
Accession number :
35654950
Full Text :
https://doi.org/10.1038/s41592-022-01507-1