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Multivariate analysis of a missense variant in CREBRF reveals associations with measures of adiposity in people of Polynesian ancestries.

Authors :
Zhang JZ
Heinsberg LW
Krishnan M
Hawley NL
Major TJ
Carlson JC
Harré Hindmarsh J
Watson H
Qasim M
Stamp LK
Dalbeth N
Murphy R
Sun G
Cheng H
Naseri T
Reupena MS
Kershaw EE
Deka R
McGarvey ST
Minster RL
Merriman TR
Weeks DE
Source :
Genetic epidemiology [Genet Epidemiol] 2023 Feb; Vol. 47 (1), pp. 105-118. Date of Electronic Publication: 2022 Nov 09.
Publication Year :
2023

Abstract

The minor allele of rs373863828, a missense variant in CREB3 Regulatory Factor, is associated with several cardiometabolic phenotypes in Polynesian peoples. To better understand the variant, we tested the association of rs373863828 with a panel of correlated phenotypes (body mass index [BMI], weight, height, HDL cholesterol, triglycerides, and total cholesterol) using multivariate Bayesian association and network analyses in a Samoa cohort (n = 1632), Aotearoa New Zealand cohort (n = 1419), and combined cohort (n = 2976). An expanded set of phenotypes (adding estimated fat and fat-free mass, abdominal circumference, hip circumference, and abdominal-hip ratio) was tested in the Samoa cohort (n = 1496). In the Samoa cohort, we observed significant associations (log <subscript>10</subscript> Bayes Factor [BF] ≥ 5.0) between rs373863828 and the overall phenotype panel (8.81), weight (8.30), and BMI (6.42). In the Aotearoa New Zealand cohort, we observed suggestive associations (1.5 < log <subscript>10</subscript> BF < 5) between rs373863828 and the overall phenotype panel (4.60), weight (3.27), and BMI (1.80). In the combined cohort, we observed concordant signals with larger log <subscript>10</subscript> BFs. In the Samoa-specific expanded phenotype analyses, we also observed significant associations between rs373863828 and fat mass (5.65), abdominal circumference (5.34), and hip circumference (5.09). Bayesian networks provided evidence for a direct association of rs373863828 with weight and indirect associations with height and BMI.<br /> (© 2022 Wiley Periodicals LLC.)

Details

Language :
English
ISSN :
1098-2272
Volume :
47
Issue :
1
Database :
MEDLINE
Journal :
Genetic epidemiology
Publication Type :
Academic Journal
Accession number :
36352773
Full Text :
https://doi.org/10.1002/gepi.22508