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Multi-ancestry genome-wide association analyses improve resolution of genes and pathways influencing lung function and chronic obstructive pulmonary disease risk.

Authors :
Shrine N
Izquierdo AG
Chen J
Packer R
Hall RJ
Guyatt AL
Batini C
Thompson RJ
Pavuluri C
Malik V
Hobbs BD
Moll M
Kim W
Tal-Singer R
Bakke P
Fawcett KA
John C
Coley K
Piga NN
Pozarickij A
Lin K
Millwood IY
Chen Z
Li L
Wijnant SRA
Lahousse L
Brusselle G
Uitterlinden AG
Manichaikul A
Oelsner EC
Rich SS
Barr RG
Kerr SM
Vitart V
Brown MR
Wielscher M
Imboden M
Jeong A
Bartz TM
Gharib SA
Flexeder C
Karrasch S
Gieger C
Peters A
Stubbe B
Hu X
Ortega VE
Meyers DA
Bleecker ER
Gabriel SB
Gupta N
Smith AV
Luan J
Zhao JH
Hansen AF
Langhammer A
Willer C
Bhatta L
Porteous D
Smith BH
Campbell A
Sofer T
Lee J
Daviglus ML
Yu B
Lim E
Xu H
O'Connor GT
Thareja G
Albagha OME
Suhre K
Granell R
Faquih TO
Hiemstra PS
Slats AM
Mullin BH
Hui J
James A
Beilby J
Patasova K
Hysi P
Koskela JT
Wyss AB
Jin J
Sikdar S
Lee M
May-Wilson S
Pirastu N
Kentistou KA
Joshi PK
Timmers PRHJ
Williams AT
Free RC
Wang X
Morrison JL
Gilliland FD
Chen Z
Wang CA
Foong RE
Harris SE
Taylor A
Redmond P
Cook JP
Mahajan A
Lind L
Palviainen T
Lehtimäki T
Raitakari OT
Kaprio J
Rantanen T
Pietiläinen KH
Cox SR
Pennell CE
Hall GL
Gauderman WJ
Brightling C
Wilson JF
Vasankari T
Laitinen T
Salomaa V
Mook-Kanamori DO
Timpson NJ
Zeggini E
Dupuis J
Hayward C
Brumpton B
Langenberg C
Weiss S
Homuth G
Schmidt CO
Probst-Hensch N
Jarvelin MR
Morrison AC
Polasek O
Rudan I
Lee JH
Sayers I
Rawlins EL
Dudbridge F
Silverman EK
Strachan DP
Walters RG
Morris AP
London SJ
Cho MH
Wain LV
Hall IP
Tobin MD
Source :
Nature genetics [Nat Genet] 2023 Mar; Vol. 55 (3), pp. 410-422. Date of Electronic Publication: 2023 Mar 13.
Publication Year :
2023

Abstract

Lung-function impairment underlies chronic obstructive pulmonary disease (COPD) and predicts mortality. In the largest multi-ancestry genome-wide association meta-analysis of lung function to date, comprising 580,869 participants, we identified 1,020 independent association signals implicating 559 genes supported by ≥2 criteria from a systematic variant-to-gene mapping framework. These genes were enriched in 29 pathways. Individual variants showed heterogeneity across ancestries, age and smoking groups, and collectively as a genetic risk score showed strong association with COPD across ancestry groups. We undertook phenome-wide association studies for selected associated variants as well as trait and pathway-specific genetic risk scores to infer possible consequences of intervening in pathways underlying lung function. We highlight new putative causal variants, genes, proteins and pathways, including those targeted by existing drugs. These findings bring us closer to understanding the mechanisms underlying lung function and COPD, and should inform functional genomics experiments and potentially future COPD therapies.<br /> (© 2023. The Author(s).)

Details

Language :
English
ISSN :
1546-1718
Volume :
55
Issue :
3
Database :
MEDLINE
Journal :
Nature genetics
Publication Type :
Academic Journal
Accession number :
36914875
Full Text :
https://doi.org/10.1038/s41588-023-01314-0