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Salinibacterium sedimenticola sp. nov., Isolated from Tidal Flat Sediment.

Authors :
Lu CY
Dong L
Li S
Lian WH
Lin ZL
Zheng ZH
Gao L
Fang BZ
Li WJ
Source :
Current microbiology [Curr Microbiol] 2023 Mar 17; Vol. 80 (5), pp. 142. Date of Electronic Publication: 2023 Mar 17.
Publication Year :
2023

Abstract

An actinobacterium, designated as SYSU T00001 <superscript>T</superscript> , was isolated from a tidal flat sediment sample from Guangdong province, China. Cells were Gram-stain-positive, aerobic, motile and short rod-shaped. Colonies on marine agar 2216 were smooth, yellow-pigmented, and circular with low convexity. The isolate was able to grow at the temperature range 4-37 °C (optimum 30 °C), at pH 4.0-10.0 (optimum 7.0) and in the presence of 0-10% (w/v) NaCl. The major menaquinones were MK-11 and MK-10. The cell wall contained alanine, glutamic acid, lysine and ornithine. The major fatty acids were C <subscript>19:0</subscript> cyclo ω8c (35.7%) and anteiso C <subscript>15:0</subscript> (26.0%). The polar lipids consisted of one diphosphatidyl glycerol, one unidentified glycolipid and one unknown lipid. Whole genome sequencing of strain SYSU T00001 <superscript>T</superscript> revealed 2,837,702 bp with a DNA G + C content of 67.8%. Phylogenetic analyses clearly demonstrated that strain SYSU T00001 <superscript>T</superscript> belonged to the genus Salinibacterium, and the highest 16S rRNA gene similarity to Salinibacterium hongtaonis 194 <superscript>T</superscript> (97.8%). The ANI and dDDH values of strain SYSU T00001 <superscript>T</superscript> relative to Salinibacterium hongtaonis 194 <superscript>T</superscript> were 74.5% and 19.5%, respectively. According to our data, strain SYSU T00001 <superscript>T</superscript> represents a novel species of the genus Salinibacterium, for which the name Salinibacterium sedimenticola sp. nov. is proposed, the type strain is SYSU T00001 <superscript>T</superscript> (= GDMCC 1.3283 <superscript>T</superscript>  = KCTC 49758 <superscript>T</superscript> ).<br /> (© 2023. The Author(s), under exclusive licence to Springer Science+Business Media, LLC, part of Springer Nature.)

Details

Language :
English
ISSN :
1432-0991
Volume :
80
Issue :
5
Database :
MEDLINE
Journal :
Current microbiology
Publication Type :
Academic Journal
Accession number :
36930356
Full Text :
https://doi.org/10.1007/s00284-023-03243-x