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Characterization of the complete chloroplast genome of Dalbergia congesta (Fabaceae), an endangered legume endemic to the Nilgiri Hills of Tamil Nadu, India.

Authors :
Rather SA
Wang T
Liu H
Schneider H
Source :
Functional & integrative genomics [Funct Integr Genomics] 2023 Apr 17; Vol. 23 (2), pp. 126. Date of Electronic Publication: 2023 Apr 17.
Publication Year :
2023

Abstract

Reference-guided de novo assembly of the Dalbergia congesta chloroplast genome was carried out using whole-genome sequencing data. The newly generated chloroplast genome size had a total length of 156,048 bp and a GC content of 36.1%. The plastome showed the classical quadripartite structure with two inverted repeats regions (IRs; each 25,715 bp) separating the large single-copy region (LSC; 85,456 bp) from the small single-copy region (SSC; 19,162 bp). The plastid genome contained 111 unique genes, including 77 protein-coding genes (CDS), 30 tRNAs, and 4 rRNAs. The phylogenomic analyses based on whole chloroplast genome sequences recovered Dalbergia as a distinct clade of the Papilionoideae, with Dalbergia congesta having a sister relationship to a clade comprising D. fusca and D. cultrata. The newly available plastome sequence will facilitate future genetic and conservational research aiming to protect this economically important but highly threatened legume species.<br /> (© 2023. The Author(s), under exclusive licence to Springer-Verlag GmbH Germany, part of Springer Nature.)

Details

Language :
English
ISSN :
1438-7948
Volume :
23
Issue :
2
Database :
MEDLINE
Journal :
Functional & integrative genomics
Publication Type :
Academic Journal
Accession number :
37067625
Full Text :
https://doi.org/10.1007/s10142-023-01047-7