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Major data analysis errors invalidate cancer microbiome findings.

Authors :
Gihawi A
Ge Y
Lu J
Puiu D
Xu A
Cooper CS
Brewer DS
Pertea M
Salzberg SL
Source :
MBio [mBio] 2023 Oct 31; Vol. 14 (5), pp. e0160723. Date of Electronic Publication: 2023 Oct 09.
Publication Year :
2023

Abstract

Importance: Recent reports showing that human cancers have a distinctive microbiome have led to a flurry of papers describing microbial signatures of different cancer types. Many of these reports are based on flawed data that, upon re-analysis, completely overturns the original findings. The re-analysis conducted here shows that most of the microbes originally reported as associated with cancer were not present at all in the samples. The original report of a cancer microbiome and more than a dozen follow-up studies are, therefore, likely to be invalid.<br />Competing Interests: The authors declare no conflict of interest.

Details

Language :
English
ISSN :
2150-7511
Volume :
14
Issue :
5
Database :
MEDLINE
Journal :
MBio
Publication Type :
Academic Journal
Accession number :
37811944
Full Text :
https://doi.org/10.1128/mbio.01607-23