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Rufibacter roseolus sp. nov. and Rufibacter aurantiacus sp. nov., isolated from desert soil.

Authors :
Li S
Dong L
Lian WH
Lin ZL
Wei QC
Xiao M
Li WJ
Source :
International journal of systematic and evolutionary microbiology [Int J Syst Evol Microbiol] 2023 Oct; Vol. 73 (10).
Publication Year :
2023

Abstract

Two novel bacterial strains, designated as SYSU D00344 <superscript>T</superscript> and SYSU D00433 <superscript>T</superscript> , were isolated from soil of Gurbantunggut Desert in Xinjiang, north-west PR China. Cells of both strains were Gram-stain-negative, aerobic, short-rod-shaped, catalase-positive and non-motile. Oxidase activities of SYSU D00344 <superscript>T</superscript> and SYSU D00433 <superscript>T</superscript> were negative and positive, respectively. Optimal growth occurred at 30 °C, with 0-0.5 % (w/v) NaCl and at pH 7.0. The results of phylogenetic analysis of 16S rRNA gene sequences indicated that they represented members of the genus Rufibacter and were closely related to Rufibacter hautae NBS58-1 <superscript>T</superscript> . The results of phylogenomic analysis indicated that the two strains formed two independent and robust branches distinct from all reference type strains. The analyses of average nucleotide identity (ANI), digital DNA-DNA hybridisation (dDDH) values and 16S rRNA gene similarities between the two strains and their relatives further demonstrated that SYSU D00344 <superscript>T</superscript> and SYSU D00433 <superscript>T</superscript> represented two different novel genospecies. The polar lipids consisted of phosphatidylethanolamine, one unidentified glycolipid, two unidentified aminophospholipids, and two or four unidentified lipids. MK-7 was the only respiratory quinone. The major fatty acids (>10 %) for both strains were identified as iso-C <subscript>15 : 0</subscript> , anteiso-C <subscript>15 : 0</subscript> and summed feature 3 (C <subscript>16 : 1</subscript> ω7 c and/or C <subscript>16 : 1</subscript> ω6 c ), as well as summed feature 4 (anteiso-C <subscript>17 : 1</subscript> B and/or iso-C <subscript>17 : 1</subscript> I) for SYSU D00344 <superscript>T</superscript> and C <subscript>16 : 1</subscript> ω5 c for SYSU D00433 <superscript>T</superscript> . On the basis of the phylogenetic, phenotypic, chemotaxonomic and genotypic characteristics, we propose Rufibacter roseolus sp. nov. and Rufibacter aurantiacus sp. nov. as two novel species in the genus Rufibacter . The type strains are SYSU D00344 <superscript>T</superscript> (=CGMCC 1.8625 <superscript>T</superscript> =MCCC 1K04971 <superscript>T</superscript> =KCTC 82274 <superscript>T</superscript> ) and SYSU D00433 <superscript>T</superscript> (=CGMCC 1.8617 <superscript>T</superscript> =MCCC 1K04982 <superscript>T</superscript> =KCTC 82277 <superscript>T</superscript> ), respectively.

Details

Language :
English
ISSN :
1466-5034
Volume :
73
Issue :
10
Database :
MEDLINE
Journal :
International journal of systematic and evolutionary microbiology
Publication Type :
Academic Journal
Accession number :
37861396
Full Text :
https://doi.org/10.1099/ijsem.0.006093