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Phycobacter azelaicus gen. nov. sp. nov., a diatom symbiont isolated from the phycosphere of Asterionellopsis glacialis .

Authors :
Coe LSY
Fei C
Weston J
Amin SA
Source :
International journal of systematic and evolutionary microbiology [Int J Syst Evol Microbiol] 2023 Oct; Vol. 73 (10).
Publication Year :
2023

Abstract

A diatom-associated bacterium, designated as strain F10 <superscript>T</superscript> , was isolated from a pure culture of the pennate diatom Asterionellopsis glacialis A3 and has since been used to characterize molecular mechanisms of symbiosis between phytoplankton and bacteria, including interactions using diatom-derived azelaic acid. Its origin from a hypersaline environment, combined with its capacity for quorum sensing, biofilm formation, and potential for dimethylsulfoniopropionate methylation/cleavage, suggest it is within the family Roseobacteraceae . Initial phylogenetic analysis of the 16S rRNA gene sequence placed this isolate within the Phaeobacter genus, but recent genomic and phylogenomic analyses show strain F10 <superscript>T</superscript> is a separate lineage diverging from the genus Pseudophaeobacter . The genomic DNA G+C content is 60.0 mol%. The predominant respiratory quinone is Q-10. The major fatty acids are C <subscript>18 : 1</subscript>  ω7 c and C <subscript>16 : 0</subscript> . Strain F10 <superscript>T</superscript> also contains C <subscript>10 : 0</subscript> 3-OH and the furan-containing fatty acid 10,13-epoxy-11-methyl-octadecadienoate (9-(3-methyl-5-pentylfuran-2-yl)nonanoic acid). The major polar lipids are diphosphatidylglycerol, phosphatidylethanolamine and phosphatidylglycerol. Based on genomic, phylogenomic, phenotypic and chemotaxonomic characterizations, strain F10 <superscript>T</superscript> represents a novel genus and species with the proposed name, Phycobacter azelaicus gen. nov. sp. nov. The type strain is F10 <superscript>T</superscript> (=NCMA B37 <superscript>T</superscript> =NCIMB 15470 <superscript>T</superscript> =NRIC 2002 <superscript>T</superscript> ).

Details

Language :
English
ISSN :
1466-5034
Volume :
73
Issue :
10
Database :
MEDLINE
Journal :
International journal of systematic and evolutionary microbiology
Publication Type :
Academic Journal
Accession number :
37889154
Full Text :
https://doi.org/10.1099/ijsem.0.006104