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Genomic data resources of the Brain Somatic Mosaicism Network for neuropsychiatric diseases.

Authors :
Garrison MA
Jang Y
Bae T
Cherskov A
Emery SB
Fasching L
Jones A
Moldovan JB
Molitor C
Pochareddy S
Peters MA
Shin JH
Wang Y
Yang X
Akbarian S
Chess A
Gage FH
Gleeson JG
Kidd JM
McConnell M
Mills RE
Moran JV
Park PJ
Sestan N
Urban AE
Vaccarino FM
Walsh CA
Weinberger DR
Wheelan SJ
Abyzov A
Source :
Scientific data [Sci Data] 2023 Nov 20; Vol. 10 (1), pp. 813. Date of Electronic Publication: 2023 Nov 20.
Publication Year :
2023

Abstract

Somatic mosaicism is defined as an occurrence of two or more populations of cells having genomic sequences differing at given loci in an individual who is derived from a single zygote. It is a characteristic of multicellular organisms that plays a crucial role in normal development and disease. To study the nature and extent of somatic mosaicism in autism spectrum disorder, bipolar disorder, focal cortical dysplasia, schizophrenia, and Tourette syndrome, a multi-institutional consortium called the Brain Somatic Mosaicism Network (BSMN) was formed through the National Institute of Mental Health (NIMH). In addition to genomic data of affected and neurotypical brains, the BSMN also developed and validated a best practices somatic single nucleotide variant calling workflow through the analysis of reference brain tissue. These resources, which include >400 terabytes of data from 1087 subjects, are now available to the research community via the NIMH Data Archive (NDA) and are described here.<br /> (© 2023. The Author(s).)

Details

Language :
English
ISSN :
2052-4463
Volume :
10
Issue :
1
Database :
MEDLINE
Journal :
Scientific data
Publication Type :
Academic Journal
Accession number :
37985666
Full Text :
https://doi.org/10.1038/s41597-023-02645-7