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A novel saliva-based miRNA profile to diagnose and predict oral cancer.

Authors :
Balakittnen J
Ekanayake Weeramange C
Wallace DF
Duijf PHG
Cristino AS
Hartel G
Barrero RA
Taheri T
Kenny L
Vasani S
Batstone M
Breik O
Punyadeera C
Source :
International journal of oral science [Int J Oral Sci] 2024 Feb 18; Vol. 16 (1), pp. 14. Date of Electronic Publication: 2024 Feb 18.
Publication Year :
2024

Abstract

Oral cancer (OC) is the most common form of head and neck cancer. Despite the high incidence and unfavourable patient outcomes, currently, there are no biomarkers for the early detection of OC. This study aims to discover, develop, and validate a novel saliva-based microRNA signature for early diagnosis and prediction of OC risk in oral potentially malignant disorders (OPMD). The Cancer Genome Atlas (TCGA) miRNA sequencing data and small RNA sequencing data of saliva samples were used to discover differentially expressed miRNAs. Identified miRNAs were validated in saliva samples of OC (n = 50), OPMD (n = 52), and controls (n = 60) using quantitative real-time PCR. Eight differentially expressed miRNAs (miR-7-5p, miR-10b-5p, miR-182-5p, miR-215-5p, miR-431-5p, miR-486-3p, miR-3614-5p, and miR-4707-3p) were identified in the discovery phase and were validated. The efficiency of our eight-miRNA signature to discriminate OC and controls was: area under curve (AUC): 0.954, sensitivity: 86%, specificity: 90%, positive predictive value (PPV): 87.8% and negative predictive value (NPV): 88.5% whereas between OC and OPMD was: AUC: 0.911, sensitivity: 90%, specificity: 82.7%, PPV: 74.2% and NPV: 89.6%. We have developed a risk probability score to predict the presence or risk of OC in OPMD patients. We established a salivary miRNA signature that can aid in diagnosing and predicting OC, revolutionising the management of patients with OPMD. Together, our results shed new light on the management of OC by salivary miRNAs to the clinical utility of using miRNAs derived from saliva samples.<br /> (© 2024. The Author(s).)

Details

Language :
English
ISSN :
2049-3169
Volume :
16
Issue :
1
Database :
MEDLINE
Journal :
International journal of oral science
Publication Type :
Academic Journal
Accession number :
38368395
Full Text :
https://doi.org/10.1038/s41368-023-00273-w