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Functions and mechanisms of A-to-I RNA editing in filamentous ascomycetes.
- Source :
-
PLoS pathogens [PLoS Pathog] 2024 Jun 06; Vol. 20 (6), pp. e1012238. Date of Electronic Publication: 2024 Jun 06 (Print Publication: 2024). - Publication Year :
- 2024
-
Abstract
- Although lack of ADAR (adenosine deaminase acting on RNA) orthologs, genome-wide A-to-I editing occurs specifically during sexual reproduction in a number of filamentous ascomycetes, including Fusarium graminearum and Neurospora crassa. Unlike ADAR-mediated editing in animals, fungal A-to-I editing has a strong preference for hairpin loops and U at -1 position, which leads to frequent editing of UAG and UAA stop codons. Majority of RNA editing events in fungi are in the coding region and cause amino acid changes. Some of these editing events have been experimentally characterized for providing heterozygote and adaptive advantages in F. graminearum. Recent studies showed that FgTad2 and FgTad3, 2 ADAT (adenosine deaminase acting on tRNA) enzymes that normally catalyze the editing of A34 in the anticodon of tRNA during vegetative growth mediate A-to-I mRNA editing during sexual reproduction. Stage specificity of RNA editing is conferred by stage-specific expression of short transcript isoforms of FgTAD2 and FgTAD3 as well as cofactors such as AME1 and FIP5 that facilitate the editing of mRNA in perithecia. Taken together, fungal A-to-I RNA editing during sexual reproduction is catalyzed by ADATs and it has the same sequence and structural preferences with editing of A34 in tRNA.<br />Competing Interests: The authors have declared that no competing interests exist.<br /> (Copyright: © 2024 Wang et al. This is an open access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.)
- Subjects :
- Fungal Proteins genetics
Fungal Proteins metabolism
Ascomycota genetics
RNA, Fungal genetics
RNA, Fungal metabolism
Adenosine metabolism
Adenosine genetics
Inosine metabolism
Inosine genetics
Fusarium genetics
Neurospora crassa genetics
RNA Editing
Adenosine Deaminase genetics
Adenosine Deaminase metabolism
Subjects
Details
- Language :
- English
- ISSN :
- 1553-7374
- Volume :
- 20
- Issue :
- 6
- Database :
- MEDLINE
- Journal :
- PLoS pathogens
- Publication Type :
- Academic Journal
- Accession number :
- 38843141
- Full Text :
- https://doi.org/10.1371/journal.ppat.1012238