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Benzylic Trifluoromethyl Accelerates 1,6-Elimination Toward Rapid Probe Activation.

Authors :
Wang L
Sivakumar A
Zhang R
Cho S
Kim Y
Aggarwal T
Wang L
Izgu EC
Source :
BioRxiv : the preprint server for biology [bioRxiv] 2024 May 31. Date of Electronic Publication: 2024 May 31.
Publication Year :
2024

Abstract

Activity-based detection of hydrogen sulfide in live cells can expand our understanding of its reactivity and complex physiological effects. We have discovered a highly efficient method for fluorescent probe activation, which is driven by H <subscript>2</subscript> S-triggered 1,6-elimination of an α-CF <subscript>3</subscript> -benzyl to release resorufin. In detecting intracellular H <subscript>2</subscript> S, 4-azido-(α-CF <subscript>3</subscript> )-benzyl resorufin offers significantly faster signal generation and improved sensitivity compared to 4-azidobenzyl resorufin. Computed free energy profiles for the 1,6-elimination process support the hypothesis that a benzylic CF <subscript>3</subscript> group can reduce the activation energy barrier toward probe activation. This novel probe design allows for near-real-time detection of H <subscript>2</subscript> S in HeLa cells under stimulation conditions.<br />Competing Interests: DECLARATION OF INTEREST The authors declare no competing interests.

Details

Language :
English
Database :
MEDLINE
Journal :
BioRxiv : the preprint server for biology
Publication Type :
Academic Journal
Accession number :
38854154
Full Text :
https://doi.org/10.1101/2024.05.30.596105