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High resolution long-read telomere sequencing reveals dynamic mechanisms in aging and cancer.

Authors :
Schmidt TT
Tyer C
Rughani P
Haggblom C
Jones JR
Dai X
Frazer KA
Gage FH
Juul S
Hickey S
Karlseder J
Source :
Nature communications [Nat Commun] 2024 Jun 18; Vol. 15 (1), pp. 5149. Date of Electronic Publication: 2024 Jun 18.
Publication Year :
2024

Abstract

Telomeres are the protective nucleoprotein structures at the end of linear eukaryotic chromosomes. Telomeres' repetitive nature and length have traditionally challenged the precise assessment of the composition and length of individual human telomeres. Here, we present Telo-seq to resolve bulk, chromosome arm-specific and allele-specific human telomere lengths using Oxford Nanopore Technologies' native long-read sequencing. Telo-seq resolves telomere shortening in five population doubling increments and reveals intrasample, chromosome arm-specific, allele-specific telomere length heterogeneity. Telo-seq can reliably discriminate between telomerase- and ALT-positive cancer cell lines. Thus, Telo-seq is a tool to study telomere biology during development, aging, and cancer at unprecedented resolution.<br /> (© 2024. The Author(s).)

Details

Language :
English
ISSN :
2041-1723
Volume :
15
Issue :
1
Database :
MEDLINE
Journal :
Nature communications
Publication Type :
Academic Journal
Accession number :
38890299
Full Text :
https://doi.org/10.1038/s41467-024-48917-7