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Chromosome-level genome assembly of an oligophagous leaf beetle Ophraella communa (Coleoptera: Chrysomelidae).

Authors :
Wang YT
Zhang Y
Ma C
Ma WH
Cao LJ
Chen JC
Song W
Yang JF
Gao XY
Chen HS
Tian ZY
Desneux N
Wei SJ
Zhou ZS
Source :
Scientific data [Sci Data] 2024 Jul 06; Vol. 11 (1), pp. 735. Date of Electronic Publication: 2024 Jul 06.
Publication Year :
2024

Abstract

The leaf beetle Ophraella communa LeSage (Coleoptera: Chrysomelidae) is an effective biological control agent of the common ragweed. Here, we assembled a chromosome-level genome of the O. communa by combining Illumina, Nanopore, and Hi-C sequencing technologies. The genome size of the final genome assembly is 733.1 Mb, encompassing 17 chromosomes, with an improved contig N50 of 7.05 Mb compared to the original version. Genome annotation reveals 25,873 protein-coding genes, with functional annotations available for 22,084 genes (85.35%). Non-coding sequence annotation identified 204 rRNAs, 626 tRNAs, and 1791 small RNAs. Repetitive elements occupy 414.41 Mb, constituting 57.76% of the genome. This high-quality genome is fundamental for advancing biological control strategies employing O. communa.<br /> (© 2024. The Author(s).)

Details

Language :
English
ISSN :
2052-4463
Volume :
11
Issue :
1
Database :
MEDLINE
Journal :
Scientific data
Publication Type :
Academic Journal
Accession number :
38971852
Full Text :
https://doi.org/10.1038/s41597-024-03486-8