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Genome-wide identification of the GDSL-type esterase/lipase protein (GELP) gene family in Ricinus communis and its transcriptional regulation during germination and seedling establishment under different abiotic stresses.
- Source :
-
Plant physiology and biochemistry : PPB [Plant Physiol Biochem] 2024 Sep; Vol. 214, pp. 108939. Date of Electronic Publication: 2024 Jul 15. - Publication Year :
- 2024
-
Abstract
- GDSL-type esterase/lipase protein (GELP) genes are crucial in the specialized lipid metabolism, in the responses to abiotic stresses, and in the regulation of plant homeostasis. R. communis is an important oilseed crop species that can sustain growth and productivity when exposed to harsh environmental conditions. Herein, we raised the question of whether the GELP gene family could be involved in the acquisition of R. communis tolerance to abiotic stresses during seed germination and seedling establishment. Thus, we used bioinformatics and transcriptomics to characterize the R. communis GELP gene family. R. communis genome possesses 96 GELP genes that were characterized by extensive bioinformatics, including phylogenetic analysis, subcellular localization, exon-intron distribution, the analysis of regulatory cis-elements, tandem duplication, and physicochemical properties. Transcriptomics indicated that numerous RcGELP genes are readily responsive to high-temperature and salt stresses and might be potential candidates for genome editing techniques to develop abiotic stress-tolerant crops.<br />Competing Interests: Declaration of competing interest The authors declare no conflict of interest.<br /> (Copyright © 2024 Elsevier Masson SAS. All rights reserved.)
- Subjects :
- Esterases genetics
Esterases metabolism
Phylogeny
Lipase genetics
Lipase metabolism
Multigene Family
Genome, Plant genetics
Seedlings genetics
Seedlings growth & development
Gene Expression Regulation, Plant
Stress, Physiological genetics
Plant Proteins genetics
Plant Proteins metabolism
Germination genetics
Ricinus genetics
Ricinus metabolism
Subjects
Details
- Language :
- English
- ISSN :
- 1873-2690
- Volume :
- 214
- Database :
- MEDLINE
- Journal :
- Plant physiology and biochemistry : PPB
- Publication Type :
- Academic Journal
- Accession number :
- 39029309
- Full Text :
- https://doi.org/10.1016/j.plaphy.2024.108939