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Whole transcriptome sequencing revealed the gene regulatory network of hypoxic response in yak Sertoli cells.
- Source :
-
Scientific reports [Sci Rep] 2024 Aug 27; Vol. 14 (1), pp. 19903. Date of Electronic Publication: 2024 Aug 27. - Publication Year :
- 2024
-
Abstract
- Yaks live in the Qinghai-Tibet Plateau for a long time where oxygen is scarce, but can ensure the smooth development of testis and spermatogenesis. The key lies in the functional regulation of the Sertoli cells under hypoxia. In this study, we sequenced yak Sertoli cells cultured in normal oxygen concentration (Normoxia) and treated with low oxygen concentration (Hypoxia) by whole transcriptomics, and screened out 194 differentially expressed mRNAs (DEmRNAs), 934 differentially expressed LncRNAs (DELncRNAs) and 129 differentially expressed miRNAs (DEmiRNAs). GO and KEGG analysis showed that these differential genes were mainly concentrated in PI3K-AKT, MAPK, RAS, and other signaling pathways, and were associated with glucose metabolism, tight junction, steroid hormone synthesis, cell fusion, and immunity of yak Sertoli cells. We constructed the gene interaction network of yak Sertoli cells in hypoxia and screened out the relationship pairs related to glucose metabolism and tight junction. The results suggested that the changes in energy metabolism, tight junction, and immune regulation of yak Sertoli cells under hypoxia might provide favorable conditions for spermatogenesis. This study provides data for further study on the role of non-coding RNA in testis development and spermatogenesis of yak.<br /> (© 2024. The Author(s).)
- Subjects :
- Animals
Male
Cattle
Transcriptome
Gene Expression Profiling
RNA, Long Noncoding genetics
MicroRNAs genetics
MicroRNAs metabolism
Spermatogenesis genetics
RNA, Messenger genetics
RNA, Messenger metabolism
Signal Transduction
Cells, Cultured
Gene Expression Regulation
Sertoli Cells metabolism
Gene Regulatory Networks
Cell Hypoxia genetics
Subjects
Details
- Language :
- English
- ISSN :
- 2045-2322
- Volume :
- 14
- Issue :
- 1
- Database :
- MEDLINE
- Journal :
- Scientific reports
- Publication Type :
- Academic Journal
- Accession number :
- 39191828
- Full Text :
- https://doi.org/10.1038/s41598-024-69458-5