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Spatial transcriptomic analysis of primary and metastatic pancreatic cancers highlights tumor microenvironmental heterogeneity.

Authors :
Khaliq AM
Rajamohan M
Saeed O
Mansouri K
Adil A
Zhang C
Turk A
Carstens JL
House M
Hayat S
Nagaraju GP
Pappas SG
Wang YA
Zyromski NJ
Opyrchal M
Lee KP
O'Hagan H
El Rayes B
Masood A
Source :
Nature genetics [Nat Genet] 2024 Nov; Vol. 56 (11), pp. 2455-2465. Date of Electronic Publication: 2024 Sep 18.
Publication Year :
2024

Abstract

Although the spatial, cellular and molecular landscapes of resected pancreatic ductal adenocarcinoma (PDAC) are well documented, the characteristics of its metastatic ecology remain elusive. By applying spatially resolved transcriptomics to matched primary and metastatic PDAC samples, we discovered a conserved continuum of fibrotic, metabolic and immunosuppressive spatial ecotypes across anatomical regions. We observed spatial tumor microenvironment heterogeneity spanning beyond that previously appreciated in PDAC. Through comparative analysis, we show that the spatial ecotypes exhibit distinct enrichment between primary and metastatic sites, implying adaptability to the local environment for survival and progression. The invasive border ecotype exhibits both pro-tumorigenic and anti-tumorigenic cell-type enrichment, suggesting a potential immunotherapy target. The ecotype heterogeneity across patients emphasizes the need to map individual patient landscapes to develop personalized treatment strategies. Collectively, our findings provide critical insights into metastatic PDAC biology and serve as a valuable resource for future therapeutic exploration and molecular investigations.<br /> (© 2024. The Author(s), under exclusive licence to Springer Nature America, Inc.)

Details

Language :
English
ISSN :
1546-1718
Volume :
56
Issue :
11
Database :
MEDLINE
Journal :
Nature genetics
Publication Type :
Academic Journal
Accession number :
39294496
Full Text :
https://doi.org/10.1038/s41588-024-01914-4