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Crystal structure of l-threonine-O-3-phosphate decarboxylase CobC from Sinorhizobium meliloti involved in vitamin B 12 biosynthesis.
- Source :
-
Biochemical and biophysical research communications [Biochem Biophys Res Commun] 2024 Nov 19; Vol. 734, pp. 150767. Date of Electronic Publication: 2024 Sep 29. - Publication Year :
- 2024
-
Abstract
- Vitamin B <subscript>12</subscript> is involved in many important biochemical reactions for humans, and its deficiency can lead to serious diseases. The industrial production of vitamin B <subscript>12</subscript> is achieved through microbial fermentation. In this work, we determine the crystal structures of the l-threonine-O-3-phosphate (Thr-P) decarboxylase CobC from Sinorhizobium meliloti (SmCobC), an industrial vitamin B <subscript>12</subscript> -producing bacterium, in apo form and in complex with a reaction intermediate. Our structures supported the Thr-P decarboxylase activity of SmCobC and revealed that the positively charged substrate-binding pocket between the large and small domains determines its substrate selectivity for Thr-P. Moreover, our results provided evidence for the proposition that the AP-P linker is formed by direct incorporation of AP-P in the biosynthetic pathway of vitamin B <subscript>12</subscript> in S.meliloti.<br />Competing Interests: Declaration of competing interest The authors declare that they have no known competing financial interests or personal relationships that could have appeared to influence the work reported in this paper.<br /> (Copyright © 2024 Elsevier Inc. All rights reserved.)
- Subjects :
- Crystallography, X-Ray
Bacterial Proteins metabolism
Bacterial Proteins chemistry
Bacterial Proteins genetics
Substrate Specificity
Protein Conformation
Binding Sites
Sinorhizobium meliloti enzymology
Sinorhizobium meliloti metabolism
Sinorhizobium meliloti genetics
Vitamin B 12 metabolism
Vitamin B 12 biosynthesis
Vitamin B 12 chemistry
Carboxy-Lyases chemistry
Carboxy-Lyases metabolism
Carboxy-Lyases genetics
Models, Molecular
Subjects
Details
- Language :
- English
- ISSN :
- 1090-2104
- Volume :
- 734
- Database :
- MEDLINE
- Journal :
- Biochemical and biophysical research communications
- Publication Type :
- Academic Journal
- Accession number :
- 39366178
- Full Text :
- https://doi.org/10.1016/j.bbrc.2024.150767